[gmx-users] reg g_morph

Justin A. Lemkul jalemkul at vt.edu
Sat Jul 2 13:55:24 CEST 2011

vidhya sankar wrote:
> Dear justin,
>                      Thank you for your previous mail
> when i use g_morph_d tool as follows i am getting only one .pdb though i 
> set  -ninterm as  10
>  my command as follows
> ./g_morph_d -f1 20confout.pdb -f2 30confout.pdb -o interm.pdb -or 
> rms-interm.xvg  -ninterm 10
> what should i do to get 10 intermediate structure

You should expect only one output file.  It should have 10 intermediate frames.



Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080


More information about the gromacs.org_gmx-users mailing list