[gmx-users] final_min_step energy

[Mark Abraham]

On 4/07/2011 3:40 PM, balaji nagarajan wrote:
> Dear Users !
>
> I have a problem in taking the inter and intra molecular interaction 
> energy from a pdb ,  which is being minimized  by minim.mdp !
>
> when i use the
>
> g_energy -f  *.edr   it gives the list of all possible interaction 
> energy as average value , but i want it only for the minimized file
>
> how one can fetch that from the *.edr file

Check out g_energy -h. There are flags that allow you to choose a subset 
of the stored values.

I'm deliberately not telling you the answer - learn how to look it up 
and you'll learn other things as well :)

Mark
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