[gmx-users] Ion distribution around Cl fix
Saeid Akbarshahi
saeidakbarshahi at yahoo.com
Wed Jul 6 18:53:29 CEST 2011
Dear All
Problem : Distribution of sodium and chloride ions than chlorine fixed placein center of box simulation
I wanted to ask which graphs the density of sodium is correct ?
Box : 2.65 *2.65 *2.65 nm
force field : AMBER99SB-ILDN
Number of Na : 10
Number of Cl : 9
Number of Cl fix : 1
Time : 4 ns
Water : TIP3P
Kind Regard
saeed.akbarshahi
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20110706/60500893/attachment.html>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: minim_E.mdp
Type: application/octet-stream
Size: 1095 bytes
Desc: not available
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20110706/60500893/attachment.obj>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: nvt.mdp
Type: application/octet-stream
Size: 1210 bytes
Desc: not available
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20110706/60500893/attachment-0001.obj>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: Cl around Cl fix.png
Type: image/png
Size: 9317 bytes
Desc: not available
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20110706/60500893/attachment.png>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: Na around Cl fix.png
Type: image/png
Size: 11299 bytes
Desc: not available
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20110706/60500893/attachment-0001.png>
More information about the gromacs.org_gmx-users
mailing list