[gmx-users] Ion distribution around Cl fix

Mark Abraham Mark.Abraham at anu.edu.au
Wed Jul 6 20:05:59 CEST 2011


On 7/07/2011 2:53 AM, Saeid Akbarshahi wrote:
> Dear All
> Problem : Distribution of sodium and chloride ions thanchlorine fixed 
> placein center of box simulation
> I wanted to ask which graphs the density of sodium is correct ?
> Box : 2.65 *2.65 *2.65 nm
> force field : AMBER99SB-ILDN
> Number of Na : 10
> Number of Cl : 9
> Number of Cl fix  : 1
> Time : 4 ns
> Water : TIP3P
> Kind Regard
> saeed.akbarshahi

I do not understand your question. You don't explain anything about the 
creation of your two plots, and your "Problem:" line does not make sense.

Mark
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