[gmx-users] Ion distribution around Cl fix

Saeid Akbarshahi saeidakbarshahi at yahoo.com
Wed Jul 6 20:14:29 CEST 2011


Dear All 
Question : 

Problem : Distribution of sodium and chloride ions than chlorine fixed placein center of box simulation
I wanted to ask which graphs the density of sodium is correct ?
Box : 2.65 *2.65 *2.65 nm
force field : AMBER99SB-ILDN

Number of Na : 10 

Number of Cl : 9
Number of Cl fix  : 1
Time : 4 ns
Water : TIP3P

Kind Regard

saeed.akbarshahi
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