[gmx-users] About -chainsep and -ter
jiangsl at phys.sinica.edu.tw
Fri Jul 22 03:14:21 CEST 2011
> Right. Even if you somehow force pdb2gmx to write a topology in this case, the
> bonds are not correct and the termini are incomplete. That will hopefully be
> resolved when the bug is fixed. For now, you have a workaround. Just use
> "-chainsep interactive" and you will get a proper topology.
I understand now.
Thank you very much for your help.
More information about the gromacs.org_gmx-users