[gmx-users] Protein_model_refinement

[shahid nayeem]

Dear All
I want to refine a protein homology model, I did minimization but then
procheck does not give better Ramachandran plot. This model is a homodimer
with each chain of 609 residue and a total of 1218 residue so a long MD
simulation to search native state is not feasible. Can any one help me on
this list to tell that how should I attempt this problem.
Shahid Nayeem
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