[gmx-users] order parameter

[Poojari, Chetan]

Hi,

I want to calculate order parameter for POPC lipid.

After reading the comments made by Justin and Chris about g_order, i would like to compare my results from both g_order and vmd tcl script which  will compute order parameters from real hydrogen atoms.

Below is the link I found for vmd tcl script for order parameter:

http://www.ks.uiuc.edu/Research/vmd/mailing_list/vmd-l/att-12867/orderparam2.tcl


Please can I know if this is the rite script or is there any other vmd tcl script for calculating order parameter.



Kind Regards,
chetan.

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