[gmx-users] Minimization error

[mu xiaojia]

1 check with the rtp files in your forcefield, especially the parameters
2 check with the imput pdb file, the format matters a lot.


On Wed, Oct 19, 2011 at 8:18 AM, <aiswarya.pawar at gmail.com> wrote:

> Hi Users,
>
> I performed a simple minimization for a protein complex in vacuum. Didn't
> get any error while performing the minimization but when visualised the pdb
> file after the minimization the chains of the protein complex separated.
>
> What could be the reason.
>
> Thanks,
> Aiswarya
> Sent from my BlackBerry® on Reliance Mobile, India's No. 1 Network. Go for
> it!
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