[gmx-users] Minimization error

[Justin A. Lemkul]

aiswarya.pawar at gmail.com wrote:
> Hi Users,
> 
> I performed a simple minimization for a protein complex in vacuum. Didn't get any error while performing the minimization but when visualised the pdb file after the minimization the chains of the protein complex separated.
> 
> What could be the reason.
> 

Please see FAQ #3 under the heading:

http://www.gromacs.org/Documentation/FAQs#Analysis_and_Visualization

-Justin

> Thanks,
> Aiswarya 
> Sent from my BlackBerry® on Reliance Mobile, India's No. 1 Network. Go for it!
> 

-- 
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Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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