[gmx-users] Lyzosyme with ligand tutorial

[James Starlight]

This was due to that in .gro file corresponded to the end of productive MD
I've found this http://i1209.photobucket.com/albums/cc394/own11/mdL.png
It's looks like the protein moved out from box so I've thought that some
error occured during stimulation


>>
> I don't understand this statement.  You should also note that a periodic
> box has no "outside."  Perhaps it would be useful to post images online.  If
> you choose to do so, please follow bullet point #4 here:
>
> http://www.gromacs.org/**Support/Mailing_Lists#Mailing_**List_Etiquette<http://www.gromacs.org/Support/Mailing_Lists#Mailing_List_Etiquette>
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>
> -Justin
>
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> ==============================**==========
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> Justin A. Lemkul
> Ph.D. Candidate
> ICTAS Doctoral Scholar
> MILES-IGERT Trainee
> Department of Biochemistry
> Virginia Tech
> Blacksburg, VA
> jalemkul[at]vt.edu | (540) 231-9080
> http://www.bevanlab.biochem.**vt.edu/Pages/Personal/justin<http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin>
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