[gmx-users] Elastic network model -building

mohan maruthi sena maruthi.sena at gmail.com
Sun Aug 26 15:34:53 CEST 2012

Hi all,
            I want to build elastic network model for a protein.  To
build an Elastic network model  , I consider only C-alpha atoms of the
protein. I want to make c-alpha atoms connect(make bond) with all the
other c-alpha atoms , if it falls within certain cut-off distance.
How can i do this?

Please suggest me a way,


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