[gmx-users] mdrun -v output

[Chandan Choudhury]

On Mon, Jun 18, 2012 at 12:43 PM, Javier Cerezo <jcb1 at um.es> wrote:

>  Information messages, such as those shown on the screen during mdrun are
> output to stderr. So if you want to get them you should redirect as follows:
>
> mdrun -v -s md.tpr 2> verbose.txt
>
> In the case where you may need to get all output (from both stdout and
> stderr) you should use:
>
> mdrun -v -s md.tpr &> verbose.txt
>

Thanks. It is actually  mdrun -v -s md.tpr >& verbose.txt

>
> Javier
>
> El 18/06/12 08:49, Chandan Choudhury escribió:
>
>
> Dear gmx users,
>
> Is it possible to redirect the output of mdrun -v to a file while
> submitting the job using pbs script?
>  mdrun -v -s md.tpr > verbose.txt
> donot produce output (to file verbose.txt) while the job is running.
>
> Chandan
>
> --
> Chandan kumar Choudhury
> NCL, Pune
> INDIA
>
>
>
> --
> Javier CEREZO BASTIDA
> PhD Student
> Physical Chemistry
> Universidad de Murcia
> Murcia (Spain)
> Tel: (+34)868887434
>
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