[gmx-users] Fwd: How to overcome syntax errors

Seera Suryanarayana palusoori at gmail.com
Thu May 17 09:01:07 CEST 2012

---------- Forwarded message ----------
From: Seera Suryanarayana <palusoori at gmail.com>
Date: Thu, May 17, 2012 at 12:07 PM
Subject: How to overcome syntax errors
To: jalemkul at vt.edu

Dear Justin,
                 While i am running gromacs software i am getting the
following syntax errors.

Fatal error:
Syntax error - File 1AX8.top, line 7934
Last line read:
'## #include"ions.itp"'

I am unable to create    " _b4em.gro files".Please let me know at what
position i have to add ## #include"ions.itp" and Add NA ions or CL ions

Is there any explanation why is this happening? I would aooreciate any
help.I am new in using MD and gromacs in particular.

Suryanarayana Seera,
PhD student,
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