[gmx-users] Place water away from existing atoms

Steven Neumann s.neumann08 at gmail.com
Thu May 17 12:25:35 CEST 2012

Dear Gmx users,

My system consists of a tube which is representated by atoms which are not
connected via bonds.
genbox somehow place water molecules overlapping my tube atoms resulting in
bad contacts.

Is there anyway to add water e.g. 4A away from existing index file of my

Please, help.

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