[gmx-users] xmgrace-plotting of g_sas output (averages+standarddeviation)

[Justin A. Lemkul]

On 5/30/12 4:58 AM, Marc Hömberger wrote:
> Hello,
>
> I am currently analyzing a bunch of trajectories and one thing I am doing is to
> use g_sas to generate the average and standard deviation per residue. The
> resulting xvg file should be formatted for use with xmgrace but I do not seem to
> be able to get the standard deviation in the graph. I tried searching for some
> hints and also looked through xmgrace's manual but there was nothing about file
> format where the second column is the standardeviation and how to show that in
> the graph. Can anyone of you maybe point me in the right direction on how to
> plot the averages plus the corresponding standard deviation?
>

In the window for importing data, choose "XYDY" from the "Set type" dropdown menu.

-Justin


-- 
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Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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