[gmx-users] CG angle distribution

Steven Neumann s.neumann08 at gmail.com
Mon Jun 3 15:11:56 CEST 2013


Dear Gmx Users,

I am building coarse-grained model for my protein. I group them int0 5-10
atoms. I wish to reproduce atomistic equilibrium angles as well as the
spring constant.
Shall I use g_angle -od option and calulate distributions? Then I will use
equilibrium th0 as the centre of the gaussian distribution and adjust
spring constant to match this curve?
Please, advise.

Steven



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