[gmx-users] Re: Genbox center of box
mattbawn at gmail.com
Wed Jun 12 04:45:21 CEST 2013
OK I found the problem. I had installed Surfnet the protein cavity finder a
few weeks ago, and it turns out this also has a function called genbox! so
my silly mistake.
I was wondering why centre and not center.
On Mon, Jun 10, 2013 at 6:23 PM, Justin Lemkul [via GROMACS] <
ml-node+s5086n5009004h90 at n6.nabble.com> wrote:
> On 6/10/13 3:26 PM, Matt Bawn wrote:
> >> I have never seen such a prompt, and I cannot reproduce the problem
> > version
> >> 4.5.5 on my machine. Did you install from source, or from some
> > binary
> >> or package manager? Are you running Gromacs directly, or are you using
> > GUI
> >> interface of any sort? Does the problem persist with a non-outdated
> > version
> >> like 4.6.2?
> > I am running GROMACS that I installed and compiled myself via cygwin on
> > windows machine. This prompt has only appeared recently and previously
> > following the tutorial instructions did not yield it. I went back to a
> > previous structure that had worked and the same prompt now also appears.
> > can't think of anything that may have changed in the cygwin/gromacs
> > environment to cause this.
> Got me stumped, and I don't have a Cygwin machine to test with, so I can't
> really help much more. That prompt doesn't appear anywhere in the Gromacs
> source code, though, so it's really puzzling. Testing with 4.6.2 would be
> Justin A. Lemkul, Ph.D.
> Research Scientist
> Department of Biochemistry
> Virginia Tech
> Blacksburg, VA
> jalemkul[at]vt.edu | (540) 231-9080
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Dr Matt Bawn
Brooklyn** College CUNY
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