[gmx-users] dssp works fine, but do_dssp gives fatal error

Erik Marklund erikm at xray.bmc.uu.se
Wed Jun 12 10:55:27 CEST 2013


Hi,

Search the mailing list. This problem and its solution has been repeatedly discussed.

Erik

On 12 Jun 2013, at 10:31, Nikunj Maheshwari <nixcrazyforher at gmail.com> wrote:

> Dear all,
> 
> I installed dssp (Version 2.0.4) and it works perfect on a .pdb file.
> I am trying to use it for do_dssp command but get the following error each
> time:
> 
> "Fatal error:
> Failed to execute command: /usr/local/bin/dssp -na ddtmi68v ddwLuK68 >
> /dev/null 2> /dev/null
> "
> 
> Is there any way to rectify it?
> 
> Thanks.
> Nikunj
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