[gmx-users] dssp works fine, but do_dssp gives fatal error

[Nikunj Maheshwari]

Yes I did searched. But for most people, there were issues regarding the
path or wrong DSSP.
DSSP runs for me, but do_dssp does not.


On Wed, Jun 12, 2013 at 2:25 PM, Erik Marklund <erikm at xray.bmc.uu.se> wrote:

> Hi,
>
> Search the mailing list. This problem and its solution has been repeatedly
> discussed.
>
> Erik
>
> On 12 Jun 2013, at 10:31, Nikunj Maheshwari <nixcrazyforher at gmail.com>
> wrote:
>
> > Dear all,
> >
> > I installed dssp (Version 2.0.4) and it works perfect on a .pdb file.
> > I am trying to use it for do_dssp command but get the following error
> each
> > time:
> >
> > "Fatal error:
> > Failed to execute command: /usr/local/bin/dssp -na ddtmi68v ddwLuK68 >
> > /dev/null 2> /dev/null
> > "
> >
> > Is there any way to rectify it?
> >
> > Thanks.
> > Nikunj
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