[gmx-users] How to construct mixed lipid bilayer (Björn Sommer)

[Björn Sommer]

Am 13.11.2013 14:51, schrieb gmx-users-request at gromacs.org:
> Message: 4
> Date: Wed, 13 Nov 2013 18:44:08 +0530
> From: Nikhil Agrawal<nikhil.08oct at gmail.com>
> Subject: [gmx-users] How to construct mixed lipid bilayer
> To:gmx-users at gromacs.org
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> Dear All,
>
> can anyone tell me how to construct mixed lipid bilayer in gromacs
>
> id possible also provide me the command to construct the mixed bilayer
>
>
> Thanks in advance
>
> Nikhil

Dear Nikhil,

especially for heterogeneous bilayers our MembraneEditor was developed, 
you can download it here:

http://Cm2.CELLmicrocosmos.org

It is Java Webstart, so it is quite easy to use and install, but you can 
also download the source code in the forum.

Here you find some videos about how to use it:

http://cellmicrocosmos.org/index.php/videos

We also use it with Gromacs. There is no pre-euqilibration done in the 
MembraneEditor. But we never needed it, because the equilibration with 
Gromacs works very good.

If you have further question, just let me know. A new version with a 
number of improvements is coming during the next month!

Best wishes,
Björn