[gmx-users] gromacs.org_gmx-users Digest, Vol 115, Issue 86

Mohsen Ramezanpour ramezanpour.mohsen at gmail.com
Wed Nov 20 07:39:06 CET 2013


Hi

There are many articles about this problem. You should Google it with
keywords such as MD and Protein thermostability. You will find many useful
scientific articles which have mentioned other factors for thermostability
of Proteins.

Please have a look at the following one and follow their citations and
references and also other related articles.

http://www.tandfonline.com/doi/abs/10.1080/07391102.2004.10506956#preview

Best
Mohsen


On Wed, Nov 20, 2013 at 4:35 AM, Raghunath Satpathy <
satpathyr at rediffmail.com> wrote:

>  am checking for a designed protein for thermostability by md simulation
> (8 ns). The RMSD  of  c-alpha c-alpha back bone at 300-330 K is found to be
> slightly varies between WT and mutant protein , what other parameters
> should i consider to confirm thermostability in my desiged protein to
> analyse by md simulation.
>
> pls reply me  soon ...................
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