[gmx-users] (no subject)

[Justin Lemkul]

On Tue, Nov 26, 2013 at 4:09 AM, Mahboobeh Eslami <
mahboobeh.eslami at yahoo.com> wrote:

> hi Dear Gmx Users
>  i want to study the changing of velocity  in production stage, do i set
> gen_vel= yes, gen_temp   = 300 and gen_seed   = -1  in all mdp file for
> Equilibration and production or only in production stage? should I setother
> options  in the mdp file.
>

http://www.gromacs.org/Documentation/How-tos/Steps_to_Perform_a_Simulation-
particularly step 10.

-Justin

-- 

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Justin A. Lemkul, Ph.D.
Postdoctoral Fellow

Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 601
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201

jalemkul at outerbanks.umaryland.edu | (410) 706-7441


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