[gmx-users] flags for internal coordinates restraints

gromacs query gromacsquery at gmail.com
Wed Nov 27 01:35:44 CET 2013


Dear All

I want to simulate two polymer chains as rigid bodies, in other words
allowing two polymer to interact with each other but keeping their internal
coordinates restrained. Also it can be seen as two rods interacting with
each other.

Which flags/options can be used in Gromacs?

regards
JIomm


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