[gmx-users] error with genion

[Tsjerk Wassenaar]

Hey :)

The problem comes from the empty line before SOL. Remove it, or make it a
comment.

Cheers,

Tsjerk
On Aug 8, 2014 6:46 AM, "shahab shariati" <shahab.shariati at gmail.com> wrote:

> Dear gromacs users
>
> I add 4 Cl ions to my system using genion:
>
> genion -s ions.tpr -o system.gro -p topol.top -nn 4 -nname CL -nq -1
>
> I encountered with following error:
>
> No line with moleculetype 'SOL' found the [ molecules ] section of file
> 'topol.top'
>
> I checked topolo.top file:
>
> [ molecules ]
> ; Compound        #mols
> DPPC       128
> drg          4
>
> SOL              6382
>
> How to resolve this problem.
>
> Any help will highly appreciated.
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