[gmx-users] Martini force field for inhibitors

[Sridhar Kumar Kannam]

Dear Gromacs users,

I have very recently started working with  Gromacs and Martini force field.
I am able to generate the coarse-grained model for HIV Protease (1hvr.pdb).
I want to simulate the protein along with its inhibitor. Are there any
guidelines for building (coarse-graining) its inhibitor ?

Sorry for the naive question ...

Thank you.






-- 
Cheers !!!
Sridhar  Kumar Kannam :)