[gmx-users] Meaningless pressure values: NVT and NVE ensembles
Tsjerk Wassenaar
tsjerkw at gmail.com
Wed Nov 5 13:41:17 CET 2014
Hi Francesco,
Can you post your .mdp file?
Cheers,
Tsjerk
On Wed, Nov 5, 2014 at 1:22 PM, Francesco Mambretti <
francesco.mambretti at studenti.unimi.it> wrote:
> Statistics over 5000001 steps [ 0.0000 through 5000.0000 ps ], 5 data sets
> All statistics are over 5001 points
>
> Energy Average Err.Est. RMSD Tot-Drift
>
> -------------------------------------------------------------------------------
> Potential -8.01936 0.0002 0.0343012 0.00109667
> (kJ/mol)
> Kinetic En. 0.609979 0.00025 0.0343031 -0.00177542
> (kJ/mol)
> Total Energy -7.40938 0.00012 0.000258549 -0.00067874
> (kJ/mol)
> Temperature 49.3659 0.02 2.77617 -0.143686 (K)
> Pressure 1673.27 0.39 72.7637 1.45487 (bar)
>
> This is my ouptut...still a too short run?
> It is strange, because other values are reasonable...
>
> Francesco
>
>
>
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--
Tsjerk A. Wassenaar, Ph.D.
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