November 2014 Archives by subject
Starting: Sat Nov 1 01:48:42 CET 2014
Ending: Sun Nov 30 22:08:32 CET 2014
Messages: 685
- [gmx-users] (no subject)
satya at physics.iisc.ernet.in
- [gmx-users] (no subject)
Thomas Lipscomb
- [gmx-users] (no subject)
Justin Lemkul
- [gmx-users] (no subject)
Thomas Lipscomb
- [gmx-users] (no subject)
Justin Lemkul
- [gmx-users] (no subject)
Thomas Lipscomb
- [gmx-users] (no subject)
Justin Lemkul
- [gmx-users] (no subject)
Thomas Lipscomb
- [gmx-users] (no subject)
Thomas Lipscomb
- [gmx-users] (no subject)
Justin Lemkul
- [gmx-users] (no subject)
Thomas Lipscomb
- [gmx-users] (no subject)
Justin Lemkul
- [gmx-users] (no subject)
Thomas Lipscomb
- [gmx-users] (no subject)
Justin Lemkul
- [gmx-users] (no subject)
Alexander Law
- [gmx-users] (no subject)
behnaz abdolmaleki
- [gmx-users] (no subject)
Justin Lemkul
- [gmx-users] (no subject)
soumadwip ghosh
- [gmx-users] (no subject)
Hooman Vahidi
- [gmx-users] (no subject)
Hooman Vahidi
- [gmx-users] A box of amino acids
Kevin C Chan
- [gmx-users] A box of amino acids
Mark Abraham
- [gmx-users] adding an acid as n-terminus
Velia Minicozzi
- [gmx-users] adding an acid as n-terminus
Mark Abraham
- [gmx-users] adding an acid as n-terminus
Justin Lemkul
- [gmx-users] adding ions in Gromacs 4.6.5
soumadwip ghosh
- [gmx-users] adding ions in Gromacs 4.6.5
Justin Lemkul
- [gmx-users] adding ions in Gromacs 4.6.5
soumadwip ghosh
- [gmx-users] adding ions in Gromacs 4.6.5
Justin Lemkul
- [gmx-users] adding ions in Gromacs 4.6.5
soumadwip ghosh
- [gmx-users] adding ions in Gromacs 4.6.5
Justin Lemkul
- [gmx-users] addition of the .itp file of a new residue
soumadwip ghosh
- [gmx-users] addition of the .itp file of a new residue
Justin Lemkul
- [gmx-users] addition of the .itp file of a new residue
soumadwip ghosh
- [gmx-users] addition of the .itp file of a new residue
Justin Lemkul
- [gmx-users] Advice on the .mdp parameters for CG system with PW using PME
shivangi nangia
- [gmx-users] Analysis program g_wham
Kevin C Chan
- [gmx-users] Analysis program g_wham
Justin Lemkul
- [gmx-users] Apply secondary structure restraints only on part of the peptide while coarse graining
shivangi nangia
- [gmx-users] Apply secondary structure restraints only on part of the peptide while coarse graining
Tsjerk Wassenaar
- [gmx-users] Apply secondary structure restraints only on part of the peptide while coarse graining
shivangi nangia
- [gmx-users] Atom-barycenter distance
Marcelo Depólo
- [gmx-users] Avg. Volume in NPT by Small Coupling Time
Johnny Lu
- [gmx-users] Avg. Volume in NPT by Small Coupling Time
Mark Abraham
- [gmx-users] Avg. Volume in NPT by Small Coupling Time
Johnny Lu
- [gmx-users] Axis
lloyd riggs
- [gmx-users] Axis
Eric Smoll
- [gmx-users] bennet acceptance ratio
Michael Shirts
- [gmx-users] bennet acceptance ratio
Ahmet yıldırım
- [gmx-users] bennet acceptance ratio
Ahmet yıldırım
- [gmx-users] Building executable for template.c!
Anjaiah Nalaparaju
- [gmx-users] Building executable for template.c!
Mark Abraham
- [gmx-users] Building executable for template.c!
Anjaiah Nalaparaju
- [gmx-users] Calculating S^2 order parameters using iRED (Isotropic Reorientational Eigenmode Dynamics)
Bailey A.
- [gmx-users] Cardiolipin all-atom PDB and parameters (.itp)
shivangi nangia
- [gmx-users] Cardiolipin all-atom PDB and parameters (.itp)
Justin Lemkul
- [gmx-users] Cardiolipin all-atom PDB and parameters (.itp)
Tsjerk Wassenaar
- [gmx-users] centering a protofibril in a box
Adriana Garro
- [gmx-users] centering a protofibril in a box
Justin Lemkul
- [gmx-users] centering a protofibril in a box
Adriana Garro
- [gmx-users] centering a protofibril in a box
Justin Lemkul
- [gmx-users] centering a protofibril in a box
Tsjerk Wassenaar
- [gmx-users] change in energy minimization
md kashif
- [gmx-users] change in energy minimization
Indu Kumari
- [gmx-users] change in energy minimization
Justin Lemkul
- [gmx-users] change in energy minimization
Justin Lemkul
- [gmx-users] Changing constraints algorithm.
Mario Fernández Pendás
- [gmx-users] Changing constraints algorithm.
Mark Abraham
- [gmx-users] Changing constraints algorithm.
Mario Fernández Pendás
- [gmx-users] Changing constraints algorithm.
Mark Abraham
- [gmx-users] Changing constraints algorithm.
Mario Fernández Pendás
- [gmx-users] changing ewald_rtol
Johnny Lu
- [gmx-users] changing ewald_rtol
Mark Abraham
- [gmx-users] changing ewald_rtol
Johnny Lu
- [gmx-users] Charmm to gromacs conversion for lipids
Venkat Reddy
- [gmx-users] Charmm to gromacs conversion for lipids
João Martins
- [gmx-users] Charmm to gromacs conversion for lipids
Venkat Reddy
- [gmx-users] Charmm to gromacs conversion for lipids
Justin Lemkul
- [gmx-users] Charmm to gromacs conversion for lipids
Justin Lemkul
- [gmx-users] Charmm to gromacs conversion for lipids
Venkat Reddy
- [gmx-users] Charmm to gromacs conversion for lipids
Justin Lemkul
- [gmx-users] Charmm to gromacs conversion for lipids
Venkat Reddy
- [gmx-users] Charmm to gromacs conversion for lipids
Venkat Reddy
- [gmx-users] Charmm to gromacs conversion for lipids
Justin Lemkul
- [gmx-users] Charmm to gromacs conversion for lipids
Venkat Reddy
- [gmx-users] Charmm to gromacs conversion for lipids
Justin Lemkul
- [gmx-users] Charmm to gromacs conversion for lipids
Venkat Reddy
- [gmx-users] Charmm to gromacs conversion for lipids
Justin Lemkul
- [gmx-users] Charmm to gromacs conversion for lipids
Venkat Reddy
- [gmx-users] Charmm to gromacs conversion for lipids
Justin Lemkul
- [gmx-users] Charmm to gromacs conversion for lipids
Venkat Reddy
- [gmx-users] classical heavy water model
xy21hb
- [gmx-users] classical heavy water model
Erik Marklund
- [gmx-users] CMake Errors when installing gromacs-5.0.2 with Orca
Matthew Kelley
- [gmx-users] CMake Errors when installing gromacs-5.0.2 with Orca
Mark Abraham
- [gmx-users] CMake Errors when installing gromacs-5.0.2 with Orca
Matthew Kelley
- [gmx-users] connecting two chains
Somayeh Alimohammadi
- [gmx-users] connecting two chains
Justin Lemkul
- [gmx-users] constant pH molecular dynamic simulation
Lan Jin
- [gmx-users] constant pH molecular dynamic simulation
Mark Abraham
- [gmx-users] contacts per residue in g_mindist
serena leone
- [gmx-users] contacts per residue in g_mindist
Justin Lemkul
- [gmx-users] Coordination vs cumulative number in g_rdf
Venkat Reddy
- [gmx-users] crazy bonds in xtc file
RINU KHATTRI
- [gmx-users] crazy bonds in xtc file
Justin Lemkul
- [gmx-users] dangling bond error no matter what pdb file I use
Thomas Lipscomb
- [gmx-users] dangling bond error no matter what pdb file I use
Justin Lemkul
- [gmx-users] Determining Force and torque of a group of atoms
akari karin
- [gmx-users] Determining Force and torque of a group of atoms
akari karin
- [gmx-users] Different fluctuation after concatenation
neha bharti
- [gmx-users] Different fluctuation after concatenation
Justin Lemkul
- [gmx-users] Dihedral angle calculation in Gromacs
Ankit Agrawal
- [gmx-users] dihedral angle g_angle?
Urszula Uciechowska
- [gmx-users] dihedral angle g_angle?
Justin Lemkul
- [gmx-users] Dihedral parameter
Hossein Lanjanian
- [gmx-users] Dihedral parameter
Justin Lemkul
- [gmx-users] Dihedral restraints
Adriana Garro
- [gmx-users] Dihedral restraints
Justin Lemkul
- [gmx-users] Dihedral restraints
Adriana Garro
- [gmx-users] Discrepancy in a single point energy simulation between Gromacs and Namd.
IÑIGO SAENZ
- [gmx-users] Discrepancy in a single point energy simulation between Gromacs and Namd.
Mark Abraham
- [gmx-users] Doubt about g_energy.
IÑIGO SAENZ
- [gmx-users] Doubt about g_energy.
Mark Abraham
- [gmx-users] Doubt about g_energy.
IÑIGO SAENZ
- [gmx-users] DPPC replication error
Priya Das
- [gmx-users] DPPC replication error
Priya Das
- [gmx-users] DPPC replication error
Priya Das
- [gmx-users] DPPC replication error
Justin Lemkul
- [gmx-users] DPPC replication error
Priya Das
- [gmx-users] DPPC replication error
Justin Lemkul
- [gmx-users] DPPC replication error
Priya Das
- [gmx-users] DPPC replication error
Justin Lemkul
- [gmx-users] DPPC replication error
Priya Das
- [gmx-users] DPPC replication error
Justin Lemkul
- [gmx-users] DPPC replication error
Priya Das
- [gmx-users] DPPC replication error
Priya Das
- [gmx-users] Dr.Lemkul's Umbrella Sampling Tutorial - grompp note on leap frog/Nose-Hoover
Agnivo Gosai
- [gmx-users] Dr.Lemkul's Umbrella Sampling Tutorial - grompp note on leap frog/Nose-Hoover
Agnivo Gosai
- [gmx-users] Dr.Lemkul's Umbrella Sampling Tutorial - grompp note on leap frog/Nose-Hoover
Justin Lemkul
- [gmx-users] DREIDING and COMPASS force fields in Gromacs
andrew biedermann
- [gmx-users] dump current rlist in cpt
Johnny Lu
- [gmx-users] dump current rlist in cpt
Mark Abraham
- [gmx-users] Dyn. Load Balance changes Cut off
Johnny Lu
- [gmx-users] Dyn. Load Balance changes Cut off
Johnny Lu
- [gmx-users] Dyn. Load Balance changes Cut off
Mark Abraham
- [gmx-users] Dyn. Load Balance changes Cut off
Johnny Lu
- [gmx-users] dynamic cross-correlation maps and older gromacs binaries
Rethi Madathil
- [gmx-users] dynamic cross-correlation maps and older gromacs binaries
Mark Abraham
- [gmx-users] dynamic cross-correlation maps and older gromacs binaries
Mark Abraham
- [gmx-users] Electrostatic force cutoffs
Nathan K Houtz
- [gmx-users] Electrostatic force cutoffs
Nathan K Houtz
- [gmx-users] Electrostatic force cutoffs
Mark Abraham
- [gmx-users] energy minimization
md kashif
- [gmx-users] energy minimization
Justin Lemkul
- [gmx-users] energy minimization
rama david
- [gmx-users] energy minimization
Onur TUNA
- [gmx-users] Energy minimization of an UNKNOWN molecule.
Kalyanashis Jana
- [gmx-users] Energy minimization of an UNKNOWN molecule.
Victor Rosas Garcia
- [gmx-users] Energy minimization of an UNKNOWN molecule.
Kalyanashis Jana
- [gmx-users] Energy minimization of an UNKNOWN molecule.
Justin Lemkul
- [gmx-users] Energy minimization of an UNKNOWN molecule.
Kalyanashis Jana
- [gmx-users] Energy minimization of an UNKNOWN molecule.
Justin Lemkul
- [gmx-users] energy minimization of protein taken from PDB
md kashif
- [gmx-users] energy minimization of protein taken from PDB
Justin Lemkul
- [gmx-users] energy minimization of protein taken from PDB
md kashif
- [gmx-users] energy minimization of protein taken from PDB
Mark Abraham
- [gmx-users] Equilibration from Non-shifted to Shifted Potential
Johnny Lu
- [gmx-users] Equilibration from Non-shifted to Shifted Potential
Mark Abraham
- [gmx-users] Equilibration from Non-shifted to Shifted Potential
Johnny Lu
- [gmx-users] Equilibration from Non-shifted to Shifted Potential
Mark Abraham
- [gmx-users] Equilibration from Non-shifted to Shifted Potential
Johnny Lu
- [gmx-users] Equilibration from Non-shifted to Shifted Potential
Johnny Lu
- [gmx-users] Error
asasa qsqs
- [gmx-users] Error
asasa qsqs
- [gmx-users] Error
Justin Lemkul
- [gmx-users] Error
asasa qsqs
- [gmx-users] Error
Justin Lemkul
- [gmx-users] Error in genrestr
Priya Das
- [gmx-users] Error in genrestr
RINU KHATTRI
- [gmx-users] Error in genrestr
Mark Abraham
- [gmx-users] Error in genrestr
RINU KHATTRI
- [gmx-users] Error in genrestr
Priya Das
- [gmx-users] Error while running free energy simulation.
vivek sharma
- [gmx-users] Error while running free energy simulation.
Justin Lemkul
- [gmx-users] Error while running free energy simulation.
vivek sharma
- [gmx-users] Error while running free energy simulation.
Mark Abraham
- [gmx-users] ex g_sas and hydrophobicity
Jernej Zidar
- [gmx-users] ex g_sas and hydrophobicity
Justin Lemkul
- [gmx-users] Extra number of bonds created than specified (ZN-CYS)
Mark Abraham
- [gmx-users] Extra number of bonds created than specified (ZN-CYS)
Nixon Raj
- [gmx-users] Extra number of bonds created than specified (ZN-CYS)
Mark Abraham
- [gmx-users] Extra number of bonds created than specified (ZN-CYS)
Nixon Raj
- [gmx-users] ffout
Eric Smoll
- [gmx-users] ffout
David van der Spoel
- [gmx-users] fitting problem
Rohit Farmer
- [gmx-users] fitting problem
Mark Abraham
- [gmx-users] Flat-bottomed position restraint set
liuyong_1007 at dicp.ac.cn
- [gmx-users] Flat-bottomed position restraint set
Justin Lemkul
- [gmx-users] Flat-bottomed position restraint set
liuyong_1007 at dicp.ac.cn
- [gmx-users] Flat-bottomed position restraint set
liuyong_1007 at dicp.ac.cn
- [gmx-users] Flat-bottomed position restraint set
Justin Lemkul
- [gmx-users] Flat-bottomed position restraint set
liuyong_1007 at dicp.ac.cn
- [gmx-users] Flat-bottomed position restraint set
Erik Marklund
- [gmx-users] Flat-bottomed position restraint set
liuyong_1007 at dicp.ac.cn
- [gmx-users] Flat-bottomed position restraint set
liuyong_1007 at dicp.ac.cn
- [gmx-users] Flat-bottomed position restraint set
Oliver Stueker
- [gmx-users] Flat-bottomed position restraint set
liuyong_1007 at dicp.ac.cn
- [gmx-users] Flat-bottomed position restraint set
Oliver Stueker
- [gmx-users] Force field parameter for Fe, Mo, Mn, Cd, Ni and Co.
majid foroughi
- [gmx-users] Force field parameter for Fe, Mo, Mn, Cd, Ni and Co.
Justin Lemkul
- [gmx-users] Free Energy calculation
RINU KHATTRI
- [gmx-users] Free Energy calculation
Justin Lemkul
- [gmx-users] Free Energy calculation
RINU KHATTRI
- [gmx-users] Free Energy calculation
Justin Lemkul
- [gmx-users] Freezing groups and energy conservation
Francesco Mambretti
- [gmx-users] Freezing groups and energy conservation
Erik Marklund
- [gmx-users] Freezing groups and energy conservation
Francesco Mambretti
- [gmx-users] Frequency dependent dielectric constant
Bharat Sharma
- [gmx-users] Frequency dependent dielectric constant
Bharat Sharma
- [gmx-users] Frequency dependent dielectric constant
Bharat Sharma
- [gmx-users] Frequency dependent dielectric constant
David van der Spoel
- [gmx-users] Fwd: Question about QM/MM calculations
Mark Abraham
- [gmx-users] Fwd: Re: Frequency dependent dielectric constant
David van der Spoel
- [gmx-users] Fwd: Re: Frequency dependent dielectric constant
David van der Spoel
- [gmx-users] Fwd: Re: Frequency dependent dielectric constant
Bharat Sharma
- [gmx-users] Fwd: Running free energy tutorial for ionic molecules
vivek sharma
- [gmx-users] g_angle
ayşe K
- [gmx-users] g_angle
Mark Abraham
- [gmx-users] g_angle
ayşe K
- [gmx-users] g_angle between three atoms
Cyrus Djahedi
- [gmx-users] g_angle between three atoms
Victor Rosas Garcia
- [gmx-users] g_angle between three atoms
Justin Lemkul
- [gmx-users] g_angle periodic
ayşe K
- [gmx-users] g_angle periodic
Tsjerk Wassenaar
- [gmx-users] g_correlation: "Software inconsistency error" Gromacs 3.3.0
Ryan Choi
- [gmx-users] g_correlation: "Software inconsistency error" Gromacs 3.3.0
David van der Spoel
- [gmx-users] g_hbond tool question
Carlos Navarro Retamal
- [gmx-users] g_hbond tool question
Erik Marklund
- [gmx-users] g_hbond tool question
Carlos Navarro Retamal
- [gmx-users] Gamess-us
Hossein Lanjanian
- [gmx-users] Genbox question
Kevin C Chan
- [gmx-users] Genbox question
Justin Lemkul
- [gmx-users] getting illegal instruction error in gromacs 4.6.4 execution
Chaitali Chandratre
- [gmx-users] getting illegal instruction error in gromacs 4.6.4 execution
Mark Abraham
- [gmx-users] gmx covar (Version 5.x) segfaults with covariance matrices bigger than 1500x1500
Machtens, Jan-Philipp
- [gmx-users] gmx covar (Version 5.x) segfaults with covariance matrices bigger than 1500x1500
Mark Abraham
- [gmx-users] gmx covar (Version 5.x) segfaults with covariance matrices bigger than 1500x1500
Machtens, Jan-Philipp
- [gmx-users] gmx covar (Version 5.x) segfaults with covariance matrices bigger than 1500x1500
Mark Abraham
- [gmx-users] GPU cards supported by Gromacs?
Jian Yin
- [gmx-users] GPU cards supported by Gromacs?
Carsten Kutzner
- [gmx-users] GPU cards supported by Gromacs?
Jian Yin
- [gmx-users] GPU cards supported by Gromacs?
Carsten Kutzner
- [gmx-users] GPU cards supported by Gromacs?
Albert
- [gmx-users] GPU cards supported by Gromacs?
Justin Lemkul
- [gmx-users] GPU cards supported by Gromacs?
Szilárd Páll
- [gmx-users] GPU cards supported by Gromacs?
Szilárd Páll
- [gmx-users] GPU cards supported by Gromacs?
Jian Yin
- [gmx-users] GROMACS 5 - problem with LINCS with freeze groups
Tomek Wlodarski
- [gmx-users] GROMACS 5 - problem with LINCS with freeze groups
Mark Abraham
- [gmx-users] GROMACS 5 - problem with LINCS with freeze groups
Tomek Wlodarski
- [gmx-users] gromacs QMMM gaussian 09 (g09) input format
Stanislav Šimko
- [gmx-users] hbond analysis
Urszula Uciechowska
- [gmx-users] hbond analysis
Justin Lemkul
- [gmx-users] Hello
Anik Sen
- [gmx-users] Hello
Justin Lemkul
- [gmx-users] help for strange linear force in Pulling
Tom
- [gmx-users] help to solve this problem
valiente
- [gmx-users] help to solve this problem
valiente
- [gmx-users] help to solve this problem
Justin Lemkul
- [gmx-users] help to solve this problem
valiente
- [gmx-users] help to solve this problem
Justin Lemkul
- [gmx-users] How much different run (with posre.itp) from no posre.itp?
Batdorj Batsaikhan
- [gmx-users] How much different run (with posre.itp) from no posre.itp?
Justin Lemkul
- [gmx-users] How rigid piston works in gromacs.
Sushma Yadav
- [gmx-users] How to add a repulsive harmonic potential
atsutoshi.okabe at takeda.com
- [gmx-users] How to add a repulsive harmonic potential
Mark Abraham
- [gmx-users] How to exclude atoms within the same molecule from an rdf.
João M. Damas
- [gmx-users] How to exclude atoms within the same molecule from an rdf.
Stella Nickerson
- [gmx-users] How to exclude atoms within the same molecule from an rdf.
Stella Nickerson
- [gmx-users] How to obtaine different protein orientations in a biphasic system
James Lord
- [gmx-users] How to obtaine different protein orientations in a biphasic system
Justin Lemkul
- [gmx-users] How to overcome the error "Atom P in residue DC 3 was not found in the rtp entry DC5 with 28 atoms while sorting atom."
Seera Suryanarayana
- [gmx-users] How to overcome the error "Atom P in residue DC 3 was not found in the rtp entry DC5 with 28 atoms while sorting atom."
Justin Lemkul
- [gmx-users] How to use make_ndx in script to combine 2 groups
Agnivo Gosai
- [gmx-users] How to use make_ndx in script to combine 2 groups
Jia Xu
- [gmx-users] implicit membrane in gromacs 4.6 or 5
atsutoshi.okabe at takeda.com
- [gmx-users] implicit membrane in gromacs 4.6 or 5
Justin Lemkul
- [gmx-users] IMPORTANT
Anik Sen
- [gmx-users] IMPORTANT
Mark Abraham
- [gmx-users] Installing GROMACS 4.6.7 on Intel Cluster
Agnivo Gosai
- [gmx-users] Installing GROMACS 4.6.7 on Intel Cluster
Justin Lemkul
- [gmx-users] Installing GROMACS 4.6.7 on Intel Cluster
Johnny Lu
- [gmx-users] Installing GROMACS 4.6.7 on Intel Cluster
Agnivo Gosai
- [gmx-users] Installing GROMACS 4.6.7 on Intel Cluster
suresh kannan
- [gmx-users] Installing GROMACS 4.6.7 on Intel Cluster
Mohd Farid Ismail
- [gmx-users] Installing GROMACS 4.6.7 on Intel Cluster
Mohd Farid Ismail
- [gmx-users] Installing GROMACS 4.6.7 on Intel Cluster
Agnivo Gosai
- [gmx-users] Installing GROMACS 4.6.7 on Intel Cluster
suresh kannan
- [gmx-users] Installing GROMACS 4.6.7 on Intel Cluster
Mark Abraham
- [gmx-users] Installing GROMACS 4.6.7 on Intel Cluster
Agnivo Gosai
- [gmx-users] Installing GROMACS 4.6.7 on Intel Cluster
Szilárd Páll
- [gmx-users] Installing GROMACS 4.6.7 on Intel Cluster
Szilárd Páll
- [gmx-users] Installing GROMACS 4.6.7 on Intel Cluster
Agnivo Gosai
- [gmx-users] Installing GROMACS 4.6.7 on Intel Cluster
Agnivo Gosai
- [gmx-users] Installing GROMACS 4.6.7 on Intel Cluster
Szilárd Páll
- [gmx-users] Installing GROMACS 4.6.7 on Intel Cluster
Szilárd Páll
- [gmx-users] Installing GROMACS 4.6.7 on Intel Cluster
Agnivo Gosai
- [gmx-users] Installing GROMACS 4.6.7 on Intel Cluster
Szilárd Páll
- [gmx-users] Installing GROMACS 4.6.7 on Intel Cluster
Mark Abraham
- [gmx-users] Installing gromacs 5.0.2 double precision with shared fftw libraries
Soren Wacker
- [gmx-users] Installing gromacs 5.0.2 double precision with shared fftw libraries
Carsten Kutzner
- [gmx-users] Installing gromacs 5.0.2 double precision with shared fftw libraries
Carsten Kutzner
- [gmx-users] Installing gromacs 5.0.2 double precision with shared fftw libraries
Soren Wacker
- [gmx-users] Installing gromacs 5.0.2 double precision with shared fftw libraries
Johnny Lu
- [gmx-users] Installing gromacs 5.0.2 double precision with shared fftw libraries
Soren Wacker
- [gmx-users] Installing gromacs 5.0.2 double precision with shared fftw libraries
Mark Abraham
- [gmx-users] Installing gromacs 5.0.2 double precision with shared fftw libraries
Soren Wacker
- [gmx-users] Installing gromacs 5.0.2 double precision with shared fftw libraries
Mark Abraham
- [gmx-users] Installing gromacs 5.0.2 double precision with shared fftw libraries
Mark Abraham
- [gmx-users] Installing gromacs 5.0.2 single precision with CUDA and MPI ??
Soren Wacker
- [gmx-users] Installing gromacs 5.0.2 single precision with CUDA and MPI ??
Mark Abraham
- [gmx-users] Installing gromacs 5.0.2 single precision with CUDA and MPI ??
Soren Wacker
- [gmx-users] Installing gromacs 5.0.2 single precision with CUDA and MPI ??
Justin Lemkul
- [gmx-users] Installing gromacs 5.0.2 single precision with CUDA and MPI ??
Soren Wacker
- [gmx-users] Installing gromacs 5.0.2 single precision with CUDA and MPI ??
Mark Abraham
- [gmx-users] Installing gromacs 5.0.2 single precision with CUDA and MPI ??
Soren Wacker
- [gmx-users] interaction between ligand and protein
Mahboobeh Eslami
- [gmx-users] interaction between ligand and protein
Onur Tuna
- [gmx-users] interaction between ligand and protein
Justin Lemkul
- [gmx-users] interaction between ligand and protein
Mahboobeh Eslami
- [gmx-users] interaction between ligand and protein
Mahboobeh Eslami
- [gmx-users] Ligand interaction
md kashif
- [gmx-users] Ligand interaction
rama david
- [gmx-users] Ligand interaction
md kashif
- [gmx-users] Ligand interaction
Justin Lemkul
- [gmx-users] Ligand is not in the same position as in PDB file
neha bharti
- [gmx-users] Ligand is not in the same position as in PDB file
Mark Abraham
- [gmx-users] Ligand is not in the same position as in PDB file
neha bharti
- [gmx-users] Ligand is not in the same position as in PDB file
Mark Abraham
- [gmx-users] lipid molecules are overlapping with protein molecule
Justin Lemkul
- [gmx-users] lipid molecules are overlapping with protein molecule
Padmani Sandhu
- [gmx-users] lipid molecules are overlapping with proteinmolecule
Padmani Sandhu
- [gmx-users] lipid molecules are overlapping with proteinmolecule
Justin Lemkul
- [gmx-users] lipid molecules are overlapping with proteinmolecule
Padmani Sandhu
- [gmx-users] Making index file
bharat gupta
- [gmx-users] Making index file
rajat desikan
- [gmx-users] Making index file
bharat gupta
- [gmx-users] Making index file
Eric Smoll
- [gmx-users] Making index file
bharat gupta
- [gmx-users] Making index file
rajat desikan
- [gmx-users] MD workstation for Gromacs
Szilárd Páll
- [gmx-users] md.log interpretation
Nizar Masbukhin
- [gmx-users] md.log interpretation
Mark Abraham
- [gmx-users] md.log interpretation
Nizar Masbukhin
- [gmx-users] mdrun in gromacs 5.0.2
marzieh dehghan
- [gmx-users] mdrun in gromacs 5.0.2
Justin Lemkul
- [gmx-users] mdrun_command_not working in cygwin
Shahid Nayeem
- [gmx-users] mdrun_command_not working in cygwin
Mirco Wahab
- [gmx-users] mdrun_command_not working in cygwin
Shahid Nayeem
- [gmx-users] mdrun_command_not working in cygwin
Mirco Wahab
- [gmx-users] Meaningless pressure values: NVT and NVE ensembles
Francesco Mambretti
- [gmx-users] Meaningless pressure values: NVT and NVE ensembles
Machtens, Jan-Philipp
- [gmx-users] Meaningless pressure values: NVT and NVE ensembles
Francesco Mambretti
- [gmx-users] Meaningless pressure values: NVT and NVE ensembles
Mark Abraham
- [gmx-users] Meaningless pressure values: NVT and NVE ensembles
Francesco Mambretti
- [gmx-users] Meaningless pressure values: NVT and NVE ensembles
Francesco Mambretti
- [gmx-users] Meaningless pressure values: NVT and NVE ensembles
Tsjerk Wassenaar
- [gmx-users] Meaningless pressure values: NVT and NVE ensembles
Tsjerk Wassenaar
- [gmx-users] Meaningless pressure values: NVT and NVE ensembles
Francesco Mambretti
- [gmx-users] Meaningless pressure values: NVT and NVE ensembles
Mark Abraham
- [gmx-users] Minimal box vectors chosen by the pressure integration
Mirco Wahab
- [gmx-users] Minimal box vectors chosen by the pressure integration
Mark Abraham
- [gmx-users] Minimal box vectors chosen by the pressure integration
Mirco Wahab
- [gmx-users] Minimization is not running
satya at physics.iisc.ernet.in
- [gmx-users] Minimization is not running
Mark Abraham
- [gmx-users] modeling for rectangular cell
Sakaguchi Daiki
- [gmx-users] Modify TIP4P to TIP4P-Ew
Cai
- [gmx-users] Modify TIP4P to TIP4P-Ew
Justin Lemkul
- [gmx-users] Modify TIP4P to TIP4P-Ew
Cai
- [gmx-users] Modify TIP4P to TIP4P-Ew
Justin Lemkul
- [gmx-users] New problem GROMACS 4.6.7 in Intel Cluster
Agnivo Gosai
- [gmx-users] New problem GROMACS 4.6.7 in Intel Cluster
Justin Lemkul
- [gmx-users] New problem GROMACS 4.6.7 in Intel Cluster
Mark Abraham
- [gmx-users] New problem GROMACS 4.6.7 in Intel Cluster
Agnivo Gosai
- [gmx-users] New problem GROMACS 4.6.7 in Intel Cluster
Justin Lemkul
- [gmx-users] number of clusters over time
Steven Neumann
- [gmx-users] number of clusters over time
David van der Spoel
- [gmx-users] number of clusters over time
Piggot T.
- [gmx-users] nvt problem
Lovika Moudgil
- [gmx-users] nvt problem
Mark Abraham
- [gmx-users] Option to run mdrun without GPUs
Hardy, Adam
- [gmx-users] Option to run mdrun without GPUs
Mark Abraham
- [gmx-users] Option to run mdrun without GPUs
Szilárd Páll
- [gmx-users] Orienting a protein along an axis in GROMACS
Thomas Lipscomb
- [gmx-users] Orienting a protein along an axis in GROMACS
Justin Lemkul
- [gmx-users] Orienting a protein along an axis in GROMACS
Thomas Lipscomb
- [gmx-users] Orienting a protein along an axis in GROMACS
Justin Lemkul
- [gmx-users] Orienting a protein along an axis in GROMACS
Justin Lemkul
- [gmx-users] paralleling Gromacs and using GPU
Hooman Vahidi
- [gmx-users] POPC with CHARMM
h.alizadeh at znu.ac.ir
- [gmx-users] POPC with CHARMM
Justin Lemkul
- [gmx-users] Position restraining protein during equilibration stage
Agnivo Gosai
- [gmx-users] Position restraining protein during equilibration stage
Agnivo Gosai
- [gmx-users] Position restraining protein during equilibration stage
Justin Lemkul
- [gmx-users] Position restraining protein during equilibration stage
Justin Lemkul
- [gmx-users] Position Restraint or remove COM from DNA
Hovakim Grabski
- [gmx-users] Position Restraint or remove COM from DNA
Justin Lemkul
- [gmx-users] Postdoctoral Position at U.S. Army Research Laboratory in Coarse-Grain Modeling and Simulation
Sergey Izvekov
- [gmx-users] Pressure Question
Johnny Lu
- [gmx-users] Pressure Question
Mark Abraham
- [gmx-users] Pressure Question
Johnny Lu
- [gmx-users] Pressure Question
Johnny Lu
- [gmx-users] Pressure Question
Téletchéa Stéphane
- [gmx-users] Pressure Question
Johnny Lu
- [gmx-users] Pressure Question
Antonio Baptista
- [gmx-users] Pressure Question
Téletchéa Stéphane
- [gmx-users] Pressure Question
Johnny Lu
- [gmx-users] Pressure Question
Johnny Lu
- [gmx-users] Pressure Question
Mark Abraham
- [gmx-users] Pressure Question
Mark Abraham
- [gmx-users] Pressure Question
Johnny Lu
- [gmx-users] Pressure Question
Johnny Lu
- [gmx-users] Pressure Question
Antonio Baptista
- [gmx-users] Problem - How to center a protein in a CG simulation
Carlos Navarro Retamal
- [gmx-users] Problem - How to center a protein in a CG simulation
Carlos Navarro Retamal
- [gmx-users] Problem - How to center a protein in a CG simulation
Erik Marklund
- [gmx-users] Problem - How to center a protein in a CG simulation
Tsjerk Wassenaar
- [gmx-users] Problem - How to center a protein in a CG simulation
Carlos Navarro Retamal
- [gmx-users] Problem - How to center a protein in a CG simulation
Tsjerk Wassenaar
- [gmx-users] Problem - How to center a protein in a CG simulation
Carlos Navarro Retamal
- [gmx-users] Problem - How to center a protein in a CG simulation
Tsjerk Wassenaar
- [gmx-users] Problem - How to center a protein in a CG simulation
Carlos Navarro Retamal
- [gmx-users] Problem - How to center a protein in a CG simulation
Justin Lemkul
- [gmx-users] Problem - How to center a protein in a CG simulation
Carlos Navarro Retamal
- [gmx-users] problem in energy minimization of protein in lipidmembrane
Padmani Sandhu
- [gmx-users] problem in energy minimization of protein in lipid membrane
Padmani Sandhu
- [gmx-users] problem in energy minimization of protein in lipid membrane
Justin Lemkul
- [gmx-users] problem in energy minimization of protein in POPC lipid membrane
Padmani Sandhu
- [gmx-users] problem in energy minimization of protein in POPC lipid membrane
Padmani Sandhu
- [gmx-users] problem in energy minimization of protein in POPC lipid membrane
Justin Lemkul
- [gmx-users] problem in NPT equilibration
soumadwip ghosh
- [gmx-users] problem in NPT equilibration
Justin Lemkul
- [gmx-users] problem in NPT equilibration
soumadwip ghosh
- [gmx-users] problem in NPT equilibration
Justin Lemkul
- [gmx-users] problem in NPT equilibration
soumadwip ghosh
- [gmx-users] problem in NPT equilibriation
soumadwip ghosh
- [gmx-users] problem in NPT equilibriation
Justin Lemkul
- [gmx-users] Problem mdrun_mpi GROMACS 4.6.1 in Intel Cluster
Agnivo Gosai
- [gmx-users] Problem mdrun_mpi GROMACS 4.6.1 in Intel Cluster
Mark Abraham
- [gmx-users] Problem mdrun_mpi GROMACS 4.6.1 in Intel Cluster
Mark Abraham
- [gmx-users] problem with phosphorylated serine
Jayant James
- [gmx-users] problem with phosphorylated serine
Justin Lemkul
- [gmx-users] problem with phosphorylated serine
Jayant James
- [gmx-users] problem with phosphorylated serine
Justin Lemkul
- [gmx-users] problem with phosphorylated serine
Jayant James
- [gmx-users] problem with phosphorylated serine
Justin Lemkul
- [gmx-users] Problems with Ion
Fábio Filippi Matioli
- [gmx-users] Problems with Ion
Fábio Filippi Matioli
- [gmx-users] Problems with Ion
Justin Lemkul
- [gmx-users] Problems with Ion
Fábio Filippi Matioli
- [gmx-users] Problems with Ion
Fábio Filippi Matioli
- [gmx-users] Problems with Ion
Justin Lemkul
- [gmx-users] problems with testing a new gromacs installation (myfirst) for correctness
infoseca
- [gmx-users] problems with testing a new gromacs installation (my
infoseca
- [gmx-users] problems with testing a new gromacs installation (my first) for correctness
infoseca
- [gmx-users] problems with testing a new gromacs installation (my first) for correctness
infoseca
- [gmx-users] problems with testing a new gromacs installation (myfirst) for correctness
Johnny Lu
- [gmx-users] Protein comparison
md kashif
- [gmx-users] Protein comparison
Onur Tuna
- [gmx-users] Protein comparison
Justin Lemkul
- [gmx-users] Protein comparison
md kashif
- [gmx-users] Protein comparison
Alexander Law
- [gmx-users] Protein comparison
rama david
- [gmx-users] Protein comparison
Onur Tuna
- [gmx-users] Protein comparison
Justin Lemkul
- [gmx-users] pseudo-random algorithm
Johnny Lu
- [gmx-users] Query of RMSD results
Sainitin Donakonda
- [gmx-users] Query of RMSD results
Justin Lemkul
- [gmx-users] Query of RMSD results
Sainitin Donakonda
- [gmx-users] Query of RMSD results
Justin Lemkul
- [gmx-users] Question about "Lysozyme in Water" tutorial by Dr. Lemkul
Smith, Micholas D.
- [gmx-users] Question about "Lysozyme in Water" tutorial by Dr. Lemkul
Nima Soltani
- [gmx-users] Question about "Lysozyme in Water" tutorial by Dr. Lemkul
Justin Lemkul
- [gmx-users] Question about GPU acceleration
chip
- [gmx-users] Question about GPU acceleration
Jernej Zidar
- [gmx-users] Question about GPU acceleration
Mark Abraham
- [gmx-users] question about pulling
Tom
- [gmx-users] Question concerning G_SAXS order parameter in mixed bilayers
Michal Skoczek
- [gmx-users] questions abot normal mode analysis in gromacs
凌未风
- [gmx-users] R: Tabulated potentials
Francesco Mambretti
- [gmx-users] ramachandran plot
Urszula Uciechowska
- [gmx-users] ramachandran plot
Tsjerk Wassenaar
- [gmx-users] ramachandran plot
Urszula Uciechowska
- [gmx-users] ramachandran plot
Tsjerk Wassenaar
- [gmx-users] ramachandran plot
Urszula Uciechowska
- [gmx-users] ramachandran plot
Tsjerk Wassenaar
- [gmx-users] ramachandran plot
Urszula Uciechowska
- [gmx-users] Re : NPT Simulation average pressure lower than Reference set pressure
Agnivo Gosai
- [gmx-users] Re : NPT Simulation average pressure lower than Reference set pressure
Justin Lemkul
- [gmx-users] Re : NPT Simulation average pressure lower than Reference set pressure
Tsjerk Wassenaar
- [gmx-users] read trr file
石锐
- [gmx-users] read trr file
Justin Lemkul
- [gmx-users] read trr file
RINU KHATTRI
- [gmx-users] read trr file
Tsjerk Wassenaar
- [gmx-users] read trr file
Patrick Fuchs
- [gmx-users] read trr file
Jakub Krajniak
- [gmx-users] read trr file
Tsjerk Wassenaar
- [gmx-users] read trr file
Patrick Fuchs
- [gmx-users] read trr file
石锐
- [gmx-users] Refcoord_scaling with Position Restraints on only a part of the protein
Machtens, Jan-Philipp
- [gmx-users] Reference group in COM pulling
WT Ren
- [gmx-users] Reference group in COM pulling
Justin Lemkul
- [gmx-users] Reference group in COM pulling
WT Ren
- [gmx-users] Reference group in COM pulling
Erik Marklund
- [gmx-users] Reference group in COM pulling
WT Ren
- [gmx-users] Regarding atom selection while using g_rdf
soumadwip ghosh
- [gmx-users] regarding do_dssp
RINU KHATTRI
- [gmx-users] regarding do_dssp
RINU KHATTRI
- [gmx-users] regarding do_dssp
Justin Lemkul
- [gmx-users] regarding frames in gromacs
RINU KHATTRI
- [gmx-users] regarding frames in gromacs
Mark Abraham
- [gmx-users] regarding frames in gromacs
RINU KHATTRI
- [gmx-users] regarding frames in gromacs
Mark Abraham
- [gmx-users] regarding frames in gromacs
RINU KHATTRI
- [gmx-users] regarding frames in gromacs
Mark Abraham
- [gmx-users] regarding g_rdf
soumadwip ghosh
- [gmx-users] regarding g_rdf
soumadwip ghosh
- [gmx-users] regarding g_rdf
Justin Lemkul
- [gmx-users] Regarding simulated tempering
Nizar Masbukhin
- [gmx-users] Regarding umbrella samplling
Sathish Kumar
- [gmx-users] Regarding umbrella samplling
Justin Lemkul
- [gmx-users] Relation between bonds and nstlist
Mario Fernández Pendás
- [gmx-users] Relation between bonds and nstlist
Nizar Masbukhin
- [gmx-users] Relation between bonds and nstlist
Justin Lemkul
- [gmx-users] Relation between bonds and nstlist
Mario Fernández Pendás
- [gmx-users] Relation between bonds and nstlist
Justin Lemkul
- [gmx-users] Relation between bonds and nstlist
Mario Fernández Pendás
- [gmx-users] Relation between bonds and nstlist
Mario Fernández Pendás
- [gmx-users] Relation between bonds and nstlist
Mark Abraham
- [gmx-users] REMD and MARTINI force field
Nicolas Floquet
- [gmx-users] REMD and MARTINI force field
Michael Shirts
- [gmx-users] remove cemter of mass motion in particular direction
Mikhail Stukan
- [gmx-users] remove cemter of mass motion in particular direction
Justin Lemkul
- [gmx-users] Replica Exchange with Solute Tempering
佐藤 千夏
- [gmx-users] Replicating and equilibrating DPPC 128 lipid. pdb
Priya Das
- [gmx-users] Replicating and equilibrating DPPC 128 lipid. pdb
Catarina A. Carvalheda dos Santos
- [gmx-users] Replicating and equilibrating DPPC 128 lipid. pdb
Priya Das
- [gmx-users] Replicating and equilibrating DPPC 128 lipid. pdb
Catarina A. Carvalheda dos Santos
- [gmx-users] Replicating and equilibrating DPPC 128 lipid. pdb
Justin Lemkul
- [gmx-users] Replicating and equilibrating DPPC 128 lipid. pdb
Priya Das
- [gmx-users] Replicating and equilibrating DPPC 128 lipid. pdb
Priya Das
- [gmx-users] Replicating and equilibrating DPPC 128 lipid. pdb
Justin Lemkul
- [gmx-users] Residue Selection
Michael Carter
- [gmx-users] Residue Selection
Michael Carter
- [gmx-users] restarting of shifted potential, 4.6.7 bug?
Johnny Lu
- [gmx-users] restarting of shifted potential, 4.6.7 bug?
Johnny Lu
- [gmx-users] restarting of shifted potential, 4.6.7 bug?
Johnny Lu
- [gmx-users] restarting of shifted potential, 4.6.7 bug?
Mark Abraham
- [gmx-users] restarting of shifted potential, 4.6.7 bug?
Johnny Lu
- [gmx-users] restarting of shifted potential, 4.6.7 bug?
Johnny Lu
- [gmx-users] restarting of shifted potential, 4.6.7 bug?
Johnny Lu
- [gmx-users] restraint the CM of a molecules in any one of the directions.
Sridhar Kumar Kannam
- [gmx-users] restraint the CM of a molecules in any one of the directions.
Sridhar Kumar Kannam
- [gmx-users] restraint the CM of a molecules in any one of the directions.
Sridhar Kumar Kannam
- [gmx-users] restraint the CM of a molecules in any one of the directions.
Justin Lemkul
- [gmx-users] restraint the CM of a molecules in any one of the directions.
Justin Lemkul
- [gmx-users] s-s bond recognition
Hamid Mahdiuni
- [gmx-users] s-s bond recognition
Abhi Acharya
- [gmx-users] s-s bond recognition
mahdiuni
- [gmx-users] s-s bond recognition
Justin Lemkul
- [gmx-users] SASA with rhombic dodecahedron
rajat desikan
- [gmx-users] SASA with rhombic dodecahedron
Tsjerk Wassenaar
- [gmx-users] SASA with rhombic dodecahedron
rajat desikan
- [gmx-users] SASA with rhombic dodecahedron
rajat desikan
- [gmx-users] segmentation fault during energy minimization
soumadwip ghosh
- [gmx-users] segmentation fault during energy minimization
Justin Lemkul
- [gmx-users] selection of pulling region
jinxin
- [gmx-users] Simulating Multiple Solute Particles
Nathan K Houtz
- [gmx-users] Simulating Multiple Solute Particles
Justin Lemkul
- [gmx-users] Simulating Multiple Solute Particles
Nathan K Houtz
- [gmx-users] Simulating Multiple Solute Particles
Justin Lemkul
- [gmx-users] Simulating Multiple Solute Particles
Nathan K Houtz
- [gmx-users] Simulating Multiple Solute Particles
Justin Lemkul
- [gmx-users] Simulating Multiple Solute Particles
Nathan K Houtz
- [gmx-users] Simulating Multiple Solute Particles
Justin Lemkul
- [gmx-users] Simulating Multiple Solute Particles
Magnus Lundborg
- [gmx-users] Simulating Multiple Solute Particles
Magnus Lundborg
- [gmx-users] simulation in implicit solvent for non standar residues
Rebeca García Fandiño
- [gmx-users] size of the box for peptide
leila salimi
- [gmx-users] size of the box for peptide
Dr. Vitaly Chaban
- [gmx-users] smd
Yixin Ai
- [gmx-users] smd
Victor Rosas Garcia
- [gmx-users] smd
Erik Marklund
- [gmx-users] SMD - Pulling Error in mdrun 0.49 times box size
Agnivo Gosai
- [gmx-users] SMD - Pulling Error in mdrun 0.49 times box size
Alexander Law
- [gmx-users] SMD - Pulling Error in mdrun 0.49 times box size
Agnivo Gosai
- [gmx-users] SMD - Pulling Error in mdrun 0.49 times box size
Justin Lemkul
- [gmx-users] speed of 5.0.2 v.s 4.6
Johnny Lu
- [gmx-users] speed of 5.0.2 v.s 4.6
Mark Abraham
- [gmx-users] speed of 5.0.2 v.s 4.6
Johnny Lu
- [gmx-users] Step-by-step example of protein-membrane MD start to finish
Thomas Lipscomb
- [gmx-users] System drift with velocity verlet integrator
Kristoffer Enøe Johansson
- [gmx-users] Tabulated potentials
Francesco Mambretti
- [gmx-users] Tested and most compatible Gromacs version for Mac OS Leopard (10.5)
PAVAN PAYGHAN
- [gmx-users] Tested and most compatible Gromacs version for Mac OS Leopard (10.5)
Mark Abraham
- [gmx-users] The mdrun can not continue to run from the last check point
Smith, Micholas D.
- [gmx-users] The mdrun can not continue to run from the last check point
Mark Abraham
- [gmx-users] The mdrun can not continue to run from the last check point
liuyong_1007 at dicp.ac.cn
- [gmx-users] topolbuild (Fatal error. Source code file: readmol2.c, line: 162)
leila karami
- [gmx-users] topolbuild (Fatal error. Source code file: readmol2.c, line: 162)
leila karami
- [gmx-users] topolbuild (Fatal error. Source code file: readmol2.c, line: 162)
leila karami
- [gmx-users] topolbuild (Fatal error. Source code file: readmol2.c, line: 162)
Justin Lemkul
- [gmx-users] topolbuild (Fatal error. Source code file: readmol2.c, line: 162)
Bruce D. Ray
- [gmx-users] Tricky implementation of REST in GROMACS 4.6.5
Carlo Martinotti
- [gmx-users] Tricky implementation of REST in GROMACS 4.6.5
Justin Lemkul
- [gmx-users] Tricky implementation of REST in GROMACS 4.6.5
Carlo Martinotti
- [gmx-users] Tricky implementation of REST in GROMACS 4.6.5
Mark Abraham
- [gmx-users] Tricky implementation of REST in GROMACS 4.6.5
Szilárd Páll
- [gmx-users] Tricky implementation of REST in GROMACS 4.6.5
Szilárd Páll
- [gmx-users] trj_cavity segmentation fault
Rohit Farmer
- [gmx-users] trjconv with or without water?
Thomas Lipscomb
- [gmx-users] trjconv with or without water?
Justin Lemkul
- [gmx-users] Tryptophan Hbond Bug
Alexander Law
- [gmx-users] Tryptophan Hbond Bug
Justin Lemkul
- [gmx-users] Umbrella Sampling - Loop Motion
Michael Carter
- [gmx-users] Umbrella Sampling - Loop Motion
Justin Lemkul
- [gmx-users] Umbrella Sampling and Electric Field
Agnivo Gosai
- [gmx-users] Umbrella Sampling and flat-bottom position restraints
Justin Lemkul
- [gmx-users] Umbrella Sampling and flat-bottom position restraints
Oliver Stueker
- [gmx-users] Umbrella Sampling and flat-bottom position restraints
Justin Lemkul
- [gmx-users] Umbrella Sampling and flat-bottom position restraints
Oliver Stueker
- [gmx-users] Umbrella Sampling gromacs 5.0 error
Alexander Law
- [gmx-users] Umbrella Sampling gromacs 5.0 error
Justin Lemkul
- [gmx-users] Umbrella Sampling gromacs 5.0 error
Alexander Law
- [gmx-users] Umbrella Sampling gromacs 5.0 error
Justin Lemkul
- [gmx-users] Umbrella Sampling gromacs 5.0 error
Justin Lemkul
- [gmx-users] Umbrella Sampling gromacs 5.0 error
Alexander Law
- [gmx-users] Umbrella Sampling gromacs 5.0 error
Justin Lemkul
- [gmx-users] Umbrella Sampling gromacs 5.0 error
Alexander Law
- [gmx-users] Umbrella Sampling gromacs 5.0 error
Justin Lemkul
- [gmx-users] Umbrella sampling ignore hydrogen command -ignh
Chris Papamitrou
- [gmx-users] Umbrella sampling ignore hydrogen command -ignh
Justin Lemkul
- [gmx-users] Umbrella Sampling Results and Issues
Agnivo Gosai
- [gmx-users] Umbrella Sampling Results and Issues
HANNIBAL LECTER
- [gmx-users] Umbrella Sampling Tutorial Question
Agnivo Gosai
- [gmx-users] Umbrella Sampling Tutorial Question
Justin Lemkul
- [gmx-users] Understanding Force Plot in Umbrella Sampling Simulations
Agnivo Gosai
- [gmx-users] Understanding Force Plot in Umbrella Sampling Simulations
Justin Lemkul
- [gmx-users] Updated CHARMM36 force field files available
Justin Lemkul
- [gmx-users] Updated CHARMM36 force field files available
Guillaume Chevrot
- [gmx-users] Updated CHARMM36 force field files available
Justin Lemkul
- [gmx-users] Updated CHARMM36 force field files available
Guillaume Chevrot
- [gmx-users] Updated CHARMM36 force field files available
Justin Lemkul
- [gmx-users] Value output by g_energy
Jackson Chief Elk
- [gmx-users] Value output by g_energy
Mark Abraham
- [gmx-users] Value output by g_energy
Jackson Chief Elk
- [gmx-users] Version 12
lloyd riggs
- [gmx-users] Version problem
satya at physics.iisc.ernet.in
- [gmx-users] Version problem
Carsten Kutzner
- [gmx-users] Version problem
satya at physics.iisc.ernet.in
- [gmx-users] Version problem
Chandan Choudhury
- [gmx-users] Version problem
Nizar Masbukhin
- [gmx-users] Version problem
satya at physics.iisc.ernet.in
- [gmx-users] Version problem
Mark Abraham
- [gmx-users] Version problem
Erik Marklund
- [gmx-users] Version problem
Johnny Lu
- [gmx-users] Version problem
Johnny Lu
- [gmx-users] Very large Max Force [Energy minimisation] in water with ions
Erik Marklund
- [gmx-users] Very large Max Force [Energy minimisation] in water with ions
Kester Wong
- [gmx-users] Very large Max Force [Energy minimisation] in water with ions
Kester Wong
- [gmx-users] Very large Max Force [Energy minimisation] in water with ions
Kester Wong
- [gmx-users] Very large Max Force [Energy minimisation] in water with ions
Kester Wong
- [gmx-users] Very large Max Force [Energy minimisation] in water with ions
Justin Lemkul
- [gmx-users] Very large Max Force [Energy minimisation] in water with ions
Justin Lemkul
- [gmx-users] Very large Max Force [Energy minimisation] in water with ions
Justin Lemkul
- [gmx-users] Very large Max Force [Energy minimisation] in water with ions
Erik Marklund
- [gmx-users] Very large Max Force [Energy minimisation] in water with ions
Kester Wong
- [gmx-users] What is cth stand for, in the parameters file. It is not written in the latest manual 4.5.6.
Anik Sen
- [gmx-users] What is cth stand for, in the parameters file. It is not written in the latest manual 4.5.6.
Mark Abraham
- [gmx-users] Wrong profile obtained in umbrella sampling tutorial
Victor Rosas Garcia
- [gmx-users] Wrong profile obtained in umbrella sampling tutorial
Justin Lemkul
- [gmx-users] Wrong profile obtained in umbrella sampling tutorial
Victor Rosas Garcia
- [gmx-users] Wrong profile obtained in umbrella sampling tutorial
Justin Lemkul
- [gmx-users] Wrong profile obtained in umbrella sampling tutorial
Victor Rosas Garcia
- [gmx-users] xthompson p
David de Sancho
Last message date:
Sun Nov 30 22:08:32 CET 2014
Archived on: Sun Nov 30 22:08:32 CET 2014
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