[gmx-users] (no subject)
linuxborg2 at yahoo.com
Sun Nov 9 01:00:42 CET 2014
I am still following this tutorial:
But I got an error at this step:
"Note how many lipids were deleted and update the [ molecules ] directive of your topology accordingly. Run energy minimization. Then, scale down the lipids by a factor of 0.95 (assuming you have used default names, the result of the minimization is called "confout.gro"):
perl inflategro.pl confout.gro 0.95 DPPC 0 system_shrink1.gro 5 area_shrink1.dat"
[tlipscomb at prime-radiant KALP]$ perl inflategro.pl confout.gro 0.95 DPPC 0 system_shrink1.gro 5 area_shrink1.dat
Eeeeek! No confout.gro at all!
Died at inflategro.pl line 81.
[tlipscomb at prime-radiant KALP]$
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