[gmx-users] DPPC replication error

[Priya Das]

Dear All,

I have replicated 128 DPPC lipid bilayer using genconf -box 2 2 1.
On viewing the structure in VMD i can find 512 lipid molecules. But after
inflate. pl step, i see my protein is centered in the box but there are
only 128 lipid molecules.
Please help

On Thu, Nov 20, 2014 at 4:14 PM, Priya Das <priyadas001 at gmail.com> wrote:

> Dear All,
>
> I have replicated 128 DPPC lipid bilayer using genconf -box 2 2 1.
> On viewing the structure in VMD i can find 512 lipid molecules. But after
> inflate. pl step, i see my protein is centered in the box but there are
> only 128 lipid molecules.
> Please help
>
>
> --
> *Let us all join hands to save our " Mother Earth"*
> ------------------------------------------------------------------------
> Regards,
> Priya Das
> Research Scholar
> Dept. of Computational Biology and Bioinformatics,
> University of Kerala
>
>


-- 
*Let us all join hands to save our " Mother Earth"*
------------------------------------------------------------------------
Regards,
Priya Das
Research Scholar
Dept. of Computational Biology and Bioinformatics,
University of Kerala