[gmx-users] atoms over 100,000

Albert mailmd2011 at gmail.com
Thu Oct 9 17:33:15 CEST 2014

thanks a lot for clarification.

I've got one more question, are the cases the same for plumed.dat file 
for patched PLUMED MD simulation in Gromacs?


On 10/09/2014 05:30 PM, Justin Lemkul wrote:
> In an index file, yes.  For instance, use make_ndx to select 'r 12706' 
> and see what it does.  Confirm that you can, for example, extract that 
> residue using trjconv using that index group.
> -Justin 

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