October 2014 Archives by subject
      
      Starting: Wed Oct  1 04:08:56 CEST 2014
         Ending: Fri Oct 31 21:38:06 CET 2014
         Messages: 734
     
- [gmx-users] "Warning: For efficient BFGS minimization, use shift/switch/PME instead of cut-off"
 
GAYATHRI S
 - [gmx-users] "Warning: For efficient BFGS minimization, use shift/switch/PME instead of cut-off"
 
Justin Lemkul
 - [gmx-users] (no subject)
 
AINUN NIZAR M
 - [gmx-users] (no subject)
 
César Ávila
 - [gmx-users] (no subject)
 
Padmani Sandhu
 - [gmx-users] (no subject)
 
Dr. Vitaly Chaban
 - [gmx-users] .gro file units
 
Nilesh Dhumal
 - [gmx-users] .gro file units
 
Eric Smoll
 - [gmx-users] 2-D liquid
 
Cai
 - [gmx-users] 2-D liquid
 
Dr. Vitaly Chaban
 - [gmx-users] 2-D liquid
 
Mirco Wahab
 - [gmx-users] About the output information
 
Vinson Leung
 - [gmx-users] About the output information
 
Justin Lemkul
 - [gmx-users] Accelerated MD
 
Douglas Houston
 - [gmx-users] Accelerated MD
 
Patrick Fuchs
 - [gmx-users] Acetone parameters and transferability question
 
Ioanna Styliari
 - [gmx-users] Acetone parameters and transferability question
 
Justin Lemkul
 - [gmx-users] Acetone parameters and transferability question
 
Ioanna Styliari
 - [gmx-users] Acetone parameters and transferability question
 
Dr. Vitaly Chaban
 - [gmx-users] Acetone parameters and transferability question
 
Justin Lemkul
 - [gmx-users] Acetone parameters and transferability question
 
Ioanna Styliari
 - [gmx-users] Acetone parameters and transferability question
 
Justin Lemkul
 - [gmx-users] add Mn in itp file
 
yaser
 - [gmx-users] add Mn in itp file
 
Justin Lemkul
 - [gmx-users] add Mn in itp file
 
andrea
 - [gmx-users] asking for suggestings on conserved energy	calcualtion in NVT when using V-rescale thermostat
 
执念
 - [gmx-users] asking for suggestings on conserved energy calcualtion	in NVT when using V-rescale thermostat
 
执念
 - [gmx-users] Assigning mass to a virtual site
 
Kester Wong
 - [gmx-users] Assigning mass to a virtual site
 
Justin Lemkul
 - [gmx-users] Assigning mass to a virtual site
 
David van der Spoel
 - [gmx-users] Assigning mass to a virtual site
 
Justin Lemkul
 - [gmx-users] Assigning mass to a virtual site
 
Kester Wong
 - [gmx-users] Assigning mass to a virtual site
 
David van der Spoel
 - [gmx-users] Assigning mass to a virtual site
 
Kester Wong
 - [gmx-users] atoms over 100,000
 
Albert
 - [gmx-users] atoms over 100,000
 
Erik Marklund
 - [gmx-users] atoms over 100,000
 
Albert
 - [gmx-users] atoms over 100,000
 
Erik Marklund
 - [gmx-users] atoms over 100,000
 
Albert
 - [gmx-users] atoms over 100,000
 
Justin Lemkul
 - [gmx-users] atoms over 100,000
 
Albert
 - [gmx-users] atoms over 100,000
 
Justin Lemkul
 - [gmx-users] BASIC FOUNDATION/CONCEPTS used in GROMACS
 
amitabh jayaswal
 - [gmx-users] BASIC FOUNDATION/CONCEPTS used in GROMACS
 
Justin Lemkul
 - [gmx-users] BASIC FOUNDATION/CONCEPTS used in GROMACS
 
Smith, Micholas D.
 - [gmx-users] BASIC FOUNDATION/CONCEPTS used in GROMACS
 
Mirco Wahab
 - [gmx-users] BCAM Internship Position Announcement
 
Mario Fernández Pendás
 - [gmx-users] bennet acceptance ratio
 
Ahmet yıldırım
 - [gmx-users] binding Free energy
 
Urszula Uciechowska
 - [gmx-users] binding Free energy
 
Justin Lemkul
 - [gmx-users] binding Free energy
 
Erik Marklund
 - [gmx-users] binding Free energy
 
andrea
 - [gmx-users] boron atom parameter
 
fatemeh ramezani
 - [gmx-users] boron atom parameter
 
Justin Lemkul
 - [gmx-users] boron atom parameter
 
Justin Lemkul
 - [gmx-users] build itp file using martinize.py
 
Adriana Garro
 - [gmx-users] build itp file using martinize.py
 
Tsjerk Wassenaar
 - [gmx-users] build itp file using martinize.py
 
Adriana Garro
 - [gmx-users] build itp file using martinize.py
 
Tsjerk Wassenaar
 - [gmx-users]	CAKot8D6knnhu1_vHLDfCzF-_Zsw+85jScMbho=st6Qg3P3JneQ at mail.gmail.com
 
Padmani Sandhu
 - [gmx-users] Calculating intermolecular energies of water
 
Jackson Chief Elk
 - [gmx-users] Calculating intermolecular energies of water
 
David van der Spoel
 - [gmx-users] Calculating intermolecular energies of water
 
Mark Abraham
 - [gmx-users] Calculating intermolecular energies of water
 
Jackson Chief Elk
 - [gmx-users] Calculating intermolecular energies of water
 
Justin Lemkul
 - [gmx-users] Calculating intermolecular water interactions
 
Jackson Chief Elk
 - [gmx-users] Calculating intermolecular water interactions
 
Justin Lemkul
 - [gmx-users] Calculating intermolecular water interactions
 
Jackson Chief Elk
 - [gmx-users] Can Gromacs do this?
 
折晓会
 - [gmx-users] Can Gromacs do this?
 
Justin Lemkul
 - [gmx-users] can not split pdb beyond 1019
 
gromacs query
 - [gmx-users] can not split pdb beyond 1019
 
Mark Abraham
 - [gmx-users] Cannot combine residue position based cog selection with index output for g_select
 
Huang Dongxu
 - [gmx-users] Cannot combine residue position based cog selection with index output for g_select
 
Mark Abraham
 - [gmx-users] Cannot rename checkpoint file
 
Kannan S
 - [gmx-users] Cannot rename checkpoint file
 
Justin Lemkul
 - [gmx-users] Centring a protein complex
 
Rohit Farmer
 - [gmx-users] Centring a protein complex
 
Justin Lemkul
 - [gmx-users] Centring a protein complex
 
Rohit Farmer
 - [gmx-users] Centring a protein complex
 
Justin Lemkul
 - [gmx-users] change the mode
 
Gianfranco Bocchinfuso
 - [gmx-users] Changing constraints algorithm.
 
Dawid das
 - [gmx-users] Changing constraints algorithm.
 
Justin Lemkul
 - [gmx-users] Changing constraints algorithm.
 
Dawid das
 - [gmx-users] Changing constraints algorithm.
 
Mark Abraham
 - [gmx-users] charge group moved too far between two domain	decomposition steps?
 
Kester Wong
 - [gmx-users] charge group moved too far between two domain decomposition step
 
Kester Wong
 - [gmx-users] charge group moved too far between two domain decomposition step
 
Mark Abraham
 - [gmx-users] charge group moved too far between two domain decomposition step
 
Kester Wong
 - [gmx-users] charge group moved too far between two domain decomposition step
 
Justin Lemkul
 - [gmx-users] charge group moved too far between two domain decomposition step
 
Kester Wong
 - [gmx-users] charge group moved too far between two domain decomposition step
 
Justin Lemkul
 - [gmx-users] charge group moved too far between two domain decomposition steps?
 
Mark Abraham
 - [gmx-users] CHARMM-GUI: new features for GROMACS
 
Justin Lemkul
 - [gmx-users] Check for Vacuum Bubbles & Density
 
Johnny Lu
 - [gmx-users] combine tpr files?
 
Urszula Uciechowska
 - [gmx-users] combine tpr files?
 
Justin Lemkul
 - [gmx-users] Conserved energy ("Conserved En.") in NVT	simulation (Wade)
 
Wade
 - [gmx-users] Conserved energy ("Conserved En.") in NVT	simulation (Wade)
 
Johnny Lu
 - [gmx-users] Conserved energy ("Conserved En.") in NVT	simulation (Wade)
 
Johnny Lu
 - [gmx-users] Conserved energy ("Conserved En.") in NVT	simulation (Wade)
 
Johnny Lu
 - [gmx-users] Conserved energy ("Conserved En.") in NVT	simulation (Wade)
 
Mark Abraham
 - [gmx-users] Conserved energy ("Conserved En.") in NVT	simulation (Wade)
 
Johnny Lu
 - [gmx-users] Conserved energy ("Conserved En.") in NVT	simulation (Wade)
 
Johnny Lu
 - [gmx-users] Conserved energy ("Conserved En.") in NVT	simulation (Wade)
 
Johnny Lu
 - [gmx-users] Conserved energy ("Conserved En.") in NVT	simulation (Wade)
 
Johnny Lu
 - [gmx-users] Conserved energy ("Conserved En.") in NVT	simulation (Wade)
 
Wade
 - [gmx-users] Conserved energy ("Conserved En.") in NVT	simulation (Wade)
 
Johnny Lu
 - [gmx-users] Conserved energy ("Conserved En.") in NVT simulation
 
Wade
 - [gmx-users] Conserved energy ("Conserved En.") in NVT simulation
 
Mark Abraham
 - [gmx-users] Conserved energy ("Conserved En.") in NVT simulation
 
Mark Abraham
 - [gmx-users] Conserved quantity in NPT simulations
 
Paolo Franz
 - [gmx-users] Conserved quantity in NPT simulations
 
Michael Shirts
 - [gmx-users] Conserved quantity in NPT simulations
 
Paolo Franz
 - [gmx-users] constraint  and restraints
 
niyaz.sabir
 - [gmx-users] constraint and restraints
 
Tsjerk Wassenaar
 - [gmx-users] constraint and restraints
 
niyaz.sabir
 - [gmx-users] constraint and restraints
 
Tsjerk Wassenaar
 - [gmx-users] Dangling bond error, -ter does not fix
 
LIPSCOMB, THOMAS
 - [gmx-users] Dangling bond error, -ter does not fix
 
Justin Lemkul
 - [gmx-users] Dead inflategro.pl link?
 
andrew biedermann
 - [gmx-users] Dead inflategro.pl link?
 
Justin Lemkul
 - [gmx-users] difference between Pulling and Acceleration?
 
Tom
 - [gmx-users] difference between Pulling and Acceleration?
 
Justin Lemkul
 - [gmx-users] Distance Restraints set for water-ion cluster in gas	phase (vacuum)
 
liuyong_1007 at dicp.ac.cn
 - [gmx-users] Distance Restraints set for water-ion cluster in gas phase (vacuum)
 
Justin Lemkul
 - [gmx-users] do_dssp
 
Mahboobeh Eslami
 - [gmx-users] do_dssp problem
 
Mahboobeh Eslami
 - [gmx-users] do_dssp problem
 
Mahboobeh Eslami
 - [gmx-users] do_dssp problem
 
Marianne Schulte
 - [gmx-users] do_x3dna: A tool to analyze structural fluctuations of	DNA/RNA during simulations
 
rajendra kumar
 - [gmx-users] entangled polymer chain
 
unipa
 - [gmx-users] entangled polymer chain
 
Justin Lemkul
 - [gmx-users] error in free energy calculation
 
elham tazikeh
 - [gmx-users] error in free energy calculation
 
Justin Lemkul
 - [gmx-users] error in the middle of running mdrun_mpi
 
Nizar Masbukhin
 - [gmx-users] error in the middle of running mdrun_mpi
 
Mark Abraham
 - [gmx-users] error in the middle of running mdrun_mpi
 
Nizar Masbukhin
 - [gmx-users] error in the middle of running mdrun_mpi
 
Justin Lemkul
 - [gmx-users] error in the middle of running mdrun_mpi
 
Nizar Masbukhin
 - [gmx-users] error in the middle of running mdrun_mpi
 
Justin Lemkul
 - [gmx-users] error in the middle of running mdrun_mpi
 
Nizar Masbukhin
 - [gmx-users] error in the middle of running mdrun_mpi
 
Justin Lemkul
 - [gmx-users] error in the middle of running mdrun_mpi
 
Nizar Masbukhin
 - [gmx-users] error in the middle of running mdrun_mpi
 
Justin Lemkul
 - [gmx-users] error in the middle of running mdrun_mpi
 
Nizar Masbukhin
 - [gmx-users] error in the middle of running mdrun_mpi
 
Mark Abraham
 - [gmx-users] error in the middle of running mdrun_mpi
 
Nizar Masbukhin
 - [gmx-users] error in the middle of running mdrun_mpi
 
Nizar Masbukhin
 - [gmx-users] error in the middle of running mdrun_mpi
 
Justin Lemkul
 - [gmx-users] Error on gromacs running: Attempting to read a checkpoint file of version 15 with code of version 12
 
ookami a
 - [gmx-users] Error on gromacs running: Attempting to read a checkpoint file of version 15 with code of version 12
 
Justin Lemkul
 - [gmx-users] fatal error in gromacs
 
Yaser Hosseini
 - [gmx-users] fatal error in gromacs
 
Justin Lemkul
 - [gmx-users] Fatal error: Atom O in residue BTC 1 not found in rtp entry with 156 atoms while sorting atoms
 
Nilesh Dhumal
 - [gmx-users] Fatal error: Atom O in residue BTC 1 not found in rtp entry with 156 atoms while sorting atoms
 
Justin Lemkul
 - [gmx-users] Fatal error:No molecules were defined in the system
 
Nilesh Dhumal
 - [gmx-users] Fatal error:No molecules were defined in the system
 
Justin Lemkul
 - [gmx-users] Fatal error:No molecules were defined in the system
 
Nilesh Dhumal
 - [gmx-users] Fatal error:No molecules were defined in the system
 
Justin Lemkul
 - [gmx-users] Folding simulation using gromacs
 
AINUN NIZAR M
 - [gmx-users] Folding simulation using gromacs
 
Mirco Wahab
 - [gmx-users] Force field for phosphoserine
 
ashish bihani
 - [gmx-users] Force field for phosphoserine
 
Justin Lemkul
 - [gmx-users] Force field for unstructured protein
 
Netaly Khazanov
 - [gmx-users] Force field for unstructured protein
 
ms
 - [gmx-users] force-switch as vdv-modifier
 
Chandan Choudhury
 - [gmx-users] force-switch as vdv-modifier
 
Mark Abraham
 - [gmx-users] force-switch as vdv-modifier
 
Chandan Choudhury
 - [gmx-users] force-switch as vdv-modifier
 
Justin Lemkul
 - [gmx-users] force-switch as vdv-modifier
 
Mark Abraham
 - [gmx-users] free energy calculation
 
elham tazikeh
 - [gmx-users] free energy calculation
 
Justin Lemkul
 - [gmx-users] free energy calculation
 
RINU KHATTRI
 - [gmx-users] free energy calculation
 
Justin Lemkul
 - [gmx-users] free energy calculation for methane
 
elham tazikeh
 - [gmx-users] free energy calculation for methane
 
Justin Lemkul
 - [gmx-users] Free energy calculation of
 
Batdorj Batsaikhan
 - [gmx-users] Free Energy Change of Growing a Molecule
 
Barnett, James W
 - [gmx-users] Free Energy Change of Growing a Molecule
 
Justin Lemkul
 - [gmx-users] free energy for ethanol
 
elham tazikeh
 - [gmx-users] free energy for ethanol
 
Justin Lemkul
 - [gmx-users] Free energy in implicit solvent
 
Nizar Masbukhin
 - [gmx-users] Free energy in implicit solvent
 
David van der Spoel
 - [gmx-users] Free energy in implicit solvent
 
Nizar Masbukhin
 - [gmx-users] free energy of methan
 
elham tazikeh
 - [gmx-users] free energy problem
 
elham tazikeh
 - [gmx-users] free energy problem
 
Justin Lemkul
 - [gmx-users] free energy question
 
elham tazikeh
 - [gmx-users] free energy question
 
Justin Lemkul
 - [gmx-users] Fwd: How to calculate protein-surface interaction energy
 
James Lord
 - [gmx-users] Fwd: How to calculate protein-surface interaction energy
 
James Lord
 - [gmx-users] Fwd: Running free energy tutorial for ionic	molecules
 
Dallas Warren
 - [gmx-users] Fwd: Running free energy tutorial for ionic molecules
 
vivek sharma
 - [gmx-users] g_dist as an alternative for g _saltbr
 
Diogo Martins de Sá
 - [gmx-users] g_dist as an alternative for g _saltbr
 
Diogo Martins de Sá
 - [gmx-users] g_dist as an alternative for g _saltbr
 
Justin Lemkul
 - [gmx-users] g_dist as an alternative for g _saltbr
 
Diogo Martins de Sá
 - [gmx-users] g_dist as an alternative for g _saltbr
 
Justin Lemkul
 - [gmx-users] g_dist as an alternative for g_saltbr
 
Diogo Martins de Sá
 - [gmx-users] g_dist as an alternative for g_saltbr
 
Diogo Martins de Sá
 - [gmx-users] g_dist as an alternative for g_saltbr
 
Justin Lemkul
 - [gmx-users] g_distMat: A tool to calculate average min-distance matrix on multiple CPU cores
 
rajendra kumar
 - [gmx-users] g_rdf of differents proteins
 
Yara Alves
 - [gmx-users] g_spatial
 
Stella Nickerson
 - [gmx-users] g_tune_pme_mpi is not compatible to mdrun_mpi
 
Mark Abraham
 - [gmx-users] GLY dihedrals in amber03 family force fields
 
Tomek Wlodarski
 - [gmx-users] GLY dihedrals in amber03 family force fields
 
Justin Lemkul
 - [gmx-users] GLY dihedrals in amber03 family force fields
 
Tomek Wlodarski
 - [gmx-users] GLY dihedrals in amber03 family force fields
 
Justin Lemkul
 - [gmx-users] gmx morse potential in manual
 
Robson da Silva
 - [gmx-users] GPU performance in Gromacs 5
 
Jian Yin
 - [gmx-users] GPU performance in Gromacs 5
 
Carsten Kutzner
 - [gmx-users] graphene top file
 
fatemeh ramezani
 - [gmx-users] graphene top file
 
Justin Lemkul
 - [gmx-users] Gromacs 5.0.2 installation on Stampede
 
Amrash
 - [gmx-users] Gromacs 5.0.2 installation on Stampede
 
Roland Schulz
 - [gmx-users] Gromacs 5.0.2 no parallei run
 
Jernej Zidar
 - [gmx-users] Gromacs 5.0.2 no parallei run
 
Szilárd Páll
 - [gmx-users] Gromacs 5.0.2 no parallei run
 
Szilárd Páll
 - [gmx-users] Gromacs 5.0.2 released
 
Mark Abraham
 - [gmx-users] Gromacs API AnalysisData Class
 
Yunlong Liu
 - [gmx-users] Gromacs API AnalysisData Class
 
David van der Spoel
 - [gmx-users] Gromacs Version 5.0.2 - Bug #1603
 
Siva Dasetty
 - [gmx-users] Gromacs Version 5.0.2 - Bug #1603
 
Mark Abraham
 - [gmx-users] Gromacs Version 5.0.2 - Bug #1603
 
Siva Dasetty
 - [gmx-users] Gromacs Version 5.0.2 - Bug #1603
 
Mark Abraham
 - [gmx-users] gromacs.org_gmx-users Digest, Vol 126, Issue 66
 
Wade
 - [gmx-users] grompp fatal error in GROMACS version 4.5.7
 
Agnivo Gosai
 - [gmx-users] grompp fatal error in GROMACS version 4.5.7
 
Justin Lemkul
 - [gmx-users] grompp Segmentation fault
 
Nilesh Dhumal
 - [gmx-users] grompp Segmentation fault
 
Justin Lemkul
 - [gmx-users] grompp Segmentation fault
 
Nilesh Dhumal
 - [gmx-users] hbond analysis
 
Urszula Uciechowska
 - [gmx-users] hbond analysis
 
Justin Lemkul
 - [gmx-users] helix twisted angle?
 
Albert
 - [gmx-users] helix twisted angle?
 
Tsjerk Wassenaar
 - [gmx-users] help
 
玻耳兹曼
 - [gmx-users] help
 
Justin Lemkul
 - [gmx-users] histo-clust.xvg from g_clustsize
 
Dr. Vitaly Chaban
 - [gmx-users] how can i install sse4.1 and avx_256
 
Yaser Hosseini
 - [gmx-users] how can i install sse4.1 and avx_256
 
Milan Melicherčík
 - [gmx-users] how can i install sse4.1 and avx_256
 
Justin Lemkul
 - [gmx-users] How fshift array works?
 
jia jia
 - [gmx-users] How fshift array works?
 
David van der Spoel
 - [gmx-users] How fshift array works?
 
jia jia
 - [gmx-users] How long run should be enough for Free Energy	Calculation of a protein?
 
Batdorj Batsaikhan
 - [gmx-users] How long run should be enough for Free Energy	Calculation of a protein?
 
Batdorj Batsaikhan
 - [gmx-users] How long run should be enough for Free Energy	Calculation of a protein?
 
Batdorj Batsaikhan
 - [gmx-users] How long run should be enough for Free Energy	Calculation of a protein?
 
Batdorj Batsaikhan
 - [gmx-users] How long run should be enough for Free Energy Calculation of a protein?
 
Justin Lemkul
 - [gmx-users] How long run should be enough for Free Energy Calculation of a protein?
 
Justin Lemkul
 - [gmx-users] How to add iron parameter?
 
Guangyu Zhu
 - [gmx-users] How to add iron parameter?
 
Johnny Lu
 - [gmx-users] How to add iron parameter?
 
Johnny Lu
 - [gmx-users] How to add iron parameter?
 
Dr. Vitaly Chaban
 - [gmx-users] How to add iron parameter?
 
Justin Lemkul
 - [gmx-users] how to build topology
 
Victor Rosas Garcia
 - [gmx-users] how to build topology
 
Dr. Vitaly Chaban
 - [gmx-users] how to build topology
 
Victor Rosas Garcia
 - [gmx-users] how to build topology
 
Justin Lemkul
 - [gmx-users] how to build topology
 
Victor Rosas Garcia
 - [gmx-users] how to build topology
 
Justin Lemkul
 - [gmx-users] how to build topology
 
Victor Rosas Garcia
 - [gmx-users] How to calculate protein-surface interaction energy
 
James Lord
 - [gmx-users] How to calculate protein-surface interaction energy
 
Justin Lemkul
 - [gmx-users] How to calculate protein-surface interaction energy
 
James Lord
 - [gmx-users] How to calculate protein-surface interaction energy
 
Justin Lemkul
 - [gmx-users] How to calculate protein-surface interaction energy
 
James Lord
 - [gmx-users] How to calculate protein-surface interaction energy
 
Justin Lemkul
 - [gmx-users] How to calculate protein-surface interaction energy
 
Diogo Martins de Sá
 - [gmx-users] How to calculate protein-surface interaction energy
 
Diogo Martins de Sá
 - [gmx-users] How to calculate protein-surface interaction energy
 
James Lord
 - [gmx-users] How to calculate protein-surface interaction energy
 
Justin Lemkul
 - [gmx-users] How to calculate protein-surface interaction energy
 
James Lord
 - [gmx-users] How to calculate protein-surface interaction energy
 
Justin Lemkul
 - [gmx-users] How to calculate protein-surface interaction energy
 
James Lord
 - [gmx-users] How to calculate protein-surface interaction energy
 
Justin Lemkul
 - [gmx-users] How to calculate protein-surface interaction energy
 
James Lord
 - [gmx-users] How to calculate protein-surface interaction energy
 
Justin Lemkul
 - [gmx-users] How to calculate protein-surface interaction energy
 
James Lord
 - [gmx-users] How to calculate protein-surface interaction energy
 
Justin Lemkul
 - [gmx-users] How to calculate protein-surface interaction energy
 
Diogo Martins de Sá
 - [gmx-users] How to calculate protein-surface interaction energy
 
James Lord
 - [gmx-users] How to calculate protein-surface interaction energy
 
James Lord
 - [gmx-users] How to calculate protein-surface interaction energy
 
Justin Lemkul
 - [gmx-users] How to calculate protein-surface interaction energy
 
James Lord
 - [gmx-users] How to calculate protein-surface interaction energy
 
Justin Lemkul
 - [gmx-users] How to calculate protein-surface interaction energy
 
James Lord
 - [gmx-users] How to calculate protein-surface interaction energy
 
Justin Lemkul
 - [gmx-users] How to calculate RMSD for each residue
 
Mass
 - [gmx-users] how to generate executable file "g_energy_mpi" ?
 
Vinson Leung
 - [gmx-users] how to generate executable file "g_energy_mpi" ?
 
Justin Lemkul
 - [gmx-users] how to generate executable file "g_energy_mpi" ?
 
Vinson Leung
 - [gmx-users] how to generate executable file "g_energy_mpi" ?
 
Justin Lemkul
 - [gmx-users] how to generate executable file "g_energy_mpi" ?
 
Vinson Leung
 - [gmx-users] how to generate executable file "g_energy_mpi" ?
 
Justin Lemkul
 - [gmx-users] how to generate executable file "g_energy_mpi" ?
 
Vinson Leung
 - [gmx-users] how to generate executable file "g_energy_mpi" ?
 
Justin Lemkul
 - [gmx-users] how to generate executable file "g_energy_mpi" ?
 
Vinson Leung
 - [gmx-users] How to implement LJ 6-12 function form?
 
Kester Wong
 - [gmx-users] How to implement LJ 6-12 function form?
 
Eric Smoll
 - [gmx-users] How to implement LJ 6-12 function form?
 
Kester Wong
 - [gmx-users] How to implement LJ 6-12 function form?
 
David van der Spoel
 - [gmx-users] how to make statistics?
 
Albert
 - [gmx-users] how to make statistics?
 
Mark Abraham
 - [gmx-users] How to save trajectories of our interest into vmd
 
Seera Suryanarayana
 - [gmx-users] How to save trajectories of our interest into vmd
 
Vinay Randhawa
 - [gmx-users] How to save trajectories of our interest into vmd
 
Justin Lemkul
 - [gmx-users] how to treat the peptide apart from the ligand -reg
 
venkatesh s
 - [gmx-users] how to treat the peptide apart from the ligand -reg
 
venkatesh s
 - [gmx-users] how to treat the peptide apart from the ligand -reg
 
Justin Lemkul
 - [gmx-users] Implementation of SHAKE
 
Mario Fernández Pendás
 - [gmx-users] Implementation of SHAKE
 
Mark Abraham
 - [gmx-users] Implementation of SHAKE
 
Mario Fernández Pendás
 - [gmx-users] In itp file from prodrg, what is C0 and C1 in bonds,	angles and dihedrals section
 
fatemeh ramezani
 - [gmx-users] In itp file from prodrg, what is C0 and C1 in bonds, angles and dihedrals section
 
Justin Lemkul
 - [gmx-users] In itp file from prodrg, what is C0 and C1 in bonds, angles and dihedrals section
 
Justin Lemkul
 - [gmx-users] installing on macbook
 
Suraya Abdul Sani
 - [gmx-users] installing on macbook
 
Justin Lemkul
 - [gmx-users] installing on macbook
 
Nizar Masbukhin
 - [gmx-users] Integrity of .trr file + center coordinates
 
Eric Smoll
 - [gmx-users] intel compiler for AMD CPU?
 
Albert
 - [gmx-users] intel compiler for AMD CPU?
 
Johnny Lu
 - [gmx-users] intel compiler for AMD CPU?
 
Albert
 - [gmx-users] intel compiler for AMD CPU?
 
Johnny Lu
 - [gmx-users] intel compiler for AMD CPU?
 
Szilárd Páll
 - [gmx-users] intel compiler for AMD CPU?
 
Szilárd Páll
 - [gmx-users] Invalid order for directive bondtypes
 
Atila Petrosian
 - [gmx-users] Invalid order for directive bondtypes
 
Mark Abraham
 - [gmx-users] Invalid order for directive bondtypes
 
Atila Petrosian
 - [gmx-users] Invalid order for directive bondtypes
 
Atila Petrosian
 - [gmx-users] Invalid order for directive bondtypes
 
Mark Abraham
 - [gmx-users] Issue building 5.0.2 release for GPU
 
Éric Germaneau
 - [gmx-users] Issue building 5.0.2 release for GPU
 
Roland Schulz
 - [gmx-users] Issue building 5.0.2 release for GPU
 
Éric Germaneau
 - [gmx-users] it is very slowly to run gromacs with OpenMPI
 
Vinson Leung
 - [gmx-users] it is very slowly to run gromacs with OpenMPI
 
Mark Abraham
 - [gmx-users] lipid membrane study and the increase in z dimension on	dppc128.gro
 
rama david
 - [gmx-users] lipid membrane study and the increase in z dimension on dppc128.gro
 
Justin Lemkul
 - [gmx-users] lipid membrane study and the increase in z dimension on dppc128.gro
 
rama david
 - [gmx-users] lipid membrane study and the increase in z dimension on dppc128.gro
 
Justin Lemkul
 - [gmx-users] lipid membrane study and the increase in z dimension on dppc128.gro
 
rama david
 - [gmx-users] lipid membrane study and the increase in z dimension on dppc128.gro
 
rama david
 - [gmx-users] lipid membrane study and the increase in z dimension on dppc128.gro
 
Justin Lemkul
 - [gmx-users] Lithium Ions in Gromos53A6
 
Hardy, Adam
 - [gmx-users] Lithium Ions in Gromos53A6
 
Dr. Vitaly Chaban
 - [gmx-users] Long bond streches during simulations
 
Seera Suryanarayana
 - [gmx-users] Long bond streches during simulations
 
Justin Lemkul
 - [gmx-users] Long bond streches during simulations
 
Dr. Vitaly Chaban
 - [gmx-users] Martini + Elnedyn
 
Adriana Garro
 - [gmx-users] Martini + Elnedyn
 
Tsjerk Wassenaar
 - [gmx-users] Martini + Elnedyn
 
Adriana Garro
 - [gmx-users] Martini force field - coarse grained protein	tutorials
 
David Ackerman
 - [gmx-users] Martini force field - coarse grained protein	tutorials
 
Justin Lemkul
 - [gmx-users] MD for DNA structure
 
Urszula Uciechowska
 - [gmx-users] MD for DNA structure
 
Justin Lemkul
 - [gmx-users] MD workstation
 
Hadházi Ádám
 - [gmx-users] MD workstation
 
Mirco Wahab
 - [gmx-users] MD workstation
 
Hadházi Ádám
 - [gmx-users] MD workstation
 
Mirco Wahab
 - [gmx-users] MD workstation
 
Hadházi Ádám
 - [gmx-users] MD workstation
 
Szilárd Páll
 - [gmx-users] MD workstation
 
lloyd riggs
 - [gmx-users] MD workstation
 
Hadházi Ádám
 - [gmx-users] MD workstation
 
Szilárd Páll
 - [gmx-users] MD workstation
 
Szilárd Páll
 - [gmx-users] MD workstation
 
Hadházi Ádám
 - [gmx-users] MD workstation for Gromacs
 
Mohammad Hossein Borghei
 - [gmx-users] MD workstation for Gromacs
 
Carsten Kutzner
 - [gmx-users] MD workstation for Gromacs
 
Adelman, Joshua Lev
 - [gmx-users] MD workstation for Gromacs
 
Abhi Acharya
 - [gmx-users] mdrun error message in Computing Cluster
 
Agnivo Gosai
 - [gmx-users] mdrun error message in Computing Cluster
 
Mark Abraham
 - [gmx-users] Membrane simulations
 
lloyd riggs
 - [gmx-users] Membrane simulations
 
Smith, Micholas D.
 - [gmx-users] Membrane simulations
 
Justin Lemkul
 - [gmx-users] Multiple writing to same trajectory issue
 
Matthias Ernst
 - [gmx-users] Multiple writing to same trajectory issue
 
Mark Abraham
 - [gmx-users] Multiple writing to same trajectory issue
 
Matthias Ernst
 - [gmx-users] Mutation
 
susanta haldar
 - [gmx-users] NaCl force field with GROMOS 54A7
 
Jason Grosch
 - [gmx-users] NaCl force field with GROMOS 54A7
 
Thomas Piggot
 - [gmx-users] Naughty Vacuum Bubble in our Vesicle
 
ABEL Stephane 175950
 - [gmx-users] Naughty Vacuum Bubble in our Vesicle
 
Björn Sommer
 - [gmx-users] Naughty Vacuum Bubble in our Vesicle
 
rajat desikan
 - [gmx-users] Naughty Vacuum Bubble in our Vesicle
 
André Farias de Moura
 - [gmx-users] Naughty Vacuum Bubble in our Vesicle
 
Björn Sommer
 - [gmx-users] Naughty Vacuum Bubble in our Vesicle
 
Justin Lemkul
 - [gmx-users] Naughty Vacuum Bubble in our Vesicle
 
Patrick Fuchs
 - [gmx-users] Naughty Vacuum Bubble in our Vesicle
 
André Farias de Moura
 - [gmx-users] Naughty Vacuum Bubble in our Vesicle!
 
Björn Sommer
 - [gmx-users] Naughty Vacuum Bubble in our Vesicle!
 
André Farias de Moura
 - [gmx-users] Naughty Vacuum Bubble in our Vesicle!
 
rajat desikan
 - [gmx-users] Non-integer charges when using scaled-topology	files for REST2 simulation.
 
Abhi Acharya
 - [gmx-users] Non-integer charges when using scaled-topology	files for REST2 simulation.
 
Scott Dean
 - [gmx-users] Non-integer charges when using scaled-topology files	for REST2 simulation.
 
Abhi Acharya
 - [gmx-users] Non-integer charges when using scaled-topology files for REST2 simulation.
 
David van der Spoel
 - [gmx-users] Non-integer charges when using scaled-topology files for REST2 simulation.
 
Abhi Acharya
 - [gmx-users] Non-integer charges when using scaled-topology files for REST2 simulation.
 
David van der Spoel
 - [gmx-users] Not achieving any speedup using Open MPI
 
Rytis Slatkevičius
 - [gmx-users] Not achieving any speedup using Open MPI
 
Da-Wei Li
 - [gmx-users] Not achieving any speedup using Open MPI
 
Johnny Lu
 - [gmx-users] Not achieving any speedup using Open MPI
 
Rytis Slatkevičius
 - [gmx-users] Not achieving any speedup using Open MPI
 
Mark Abraham
 - [gmx-users] Not achieving any speedup using Open MPI
 
Rytis Slatkevičius
 - [gmx-users] Not achieving any speedup using Open MPI
 
Mark Abraham
 - [gmx-users] Not achieving any speedup using Open MPI
 
Szilárd Páll
 - [gmx-users] NPT Equilibrium?
 
Johnny Lu
 - [gmx-users] NPT Equilibrium?
 
Tsjerk Wassenaar
 - [gmx-users] NPT Equilibrium?
 
Johnny Lu
 - [gmx-users] NPT Simulation average pressure lower than	Reference set pressure
 
Dan Sponseller
 - [gmx-users] NPT Simulation average pressure lower than	Reference set pressure
 
Agnivo Gosai
 - [gmx-users] NPT Simulation average pressure lower than Reference	set pressure
 
Agnivo Gosai
 - [gmx-users] NPT Simulation average pressure lower than Reference set pressure
 
Tsjerk Wassenaar
 - [gmx-users] NPT Simulation average pressure lower than Reference set pressure
 
Dr. Vitaly Chaban
 - [gmx-users] NPT Simulation average pressure lower than Reference set pressure
 
Smith, Micholas D.
 - [gmx-users] NPT Simulation average pressure lower than Reference set pressure
 
Tsjerk Wassenaar
 - [gmx-users] NPT Simulation average pressure lower than Reference set pressure
 
Tsjerk Wassenaar
 - [gmx-users] numerical matrix from xpm file
 
João M. Damas
 - [gmx-users] NVE Energy drop in Mixed Precision 4.6.7
 
Johnny Lu
 - [gmx-users] NVE Energy drop in Mixed Precision 4.6.7
 
Johnny Lu
 - [gmx-users] NVE Energy drop in Mixed Precision 4.6.7
 
Johnny Lu
 - [gmx-users] NVE Energy drop in Mixed Precision 4.6.7
 
Guillaume Chevrot
 - [gmx-users] NVE Energy drop in Mixed Precision 4.6.7
 
Mark Abraham
 - [gmx-users] NVE Energy drop in Mixed Precision 4.6.7
 
Johnny Lu
 - [gmx-users] NVE Energy drop in Mixed Precision 4.6.7
 
Mark Abraham
 - [gmx-users] OPLSAA
 
Eric Smoll
 - [gmx-users] OPLSAA
 
Justin Lemkul
 - [gmx-users] OPLSAA
 
Dr. Vitaly Chaban
 - [gmx-users] Packmol starting .pdb and proper equilibration
 
Ioanna Styliari
 - [gmx-users] Packmol starting .pdb and proper equilibration
 
Dr. Vitaly Chaban
 - [gmx-users] Packmol starting .pdb and proper equilibration
 
Justin Lemkul
 - [gmx-users] Packmol starting .pdb and proper equilibration
 
Ioanna Styliari
 - [gmx-users] Packmol starting .pdb and proper equilibration
 
Justin Lemkul
 - [gmx-users] Packmol starting .pdb and proper equilibration
 
Dr. Vitaly Chaban
 - [gmx-users] parachem GMX
 
xy21hb
 - [gmx-users] parachem GMX
 
Justin Lemkul
 - [gmx-users] Parameter conversion from GAFF to Gromacs
 
Rohit Farmer
 - [gmx-users] Parameter conversion from GAFF to Gromacs
 
Justin Lemkul
 - [gmx-users] Parameter conversion from GAFF to Gromacs
 
Rohit Farmer
 - [gmx-users] Parameter dump
 
Eric Smoll
 - [gmx-users] Parameter dump
 
Dallas Warren
 - [gmx-users] pdb2gmx
 
Eric Smoll
 - [gmx-users] pdb2gmx
 
Mark Abraham
 - [gmx-users] pdb2gmx
 
Eric Smoll
 - [gmx-users] pdb2gmx
 
Eric Smoll
 - [gmx-users] pdb2gmx
 
Justin Lemkul
 - [gmx-users] pdb2gmx
 
Justin Lemkul
 - [gmx-users] pdb2gmx  ffG43a1 force field
 
Nilesh Dhumal
 - [gmx-users] pdb2gmx  ffG43a1 force field
 
Justin Lemkul
 - [gmx-users] pdb2gmx  ffG43a1 force field
 
Nilesh Dhumal
 - [gmx-users] pdb2gmx  ffG43a1 force field
 
Justin Lemkul
 - [gmx-users] pdb2gmx  ffG43a1 force field
 
Nilesh Dhumal
 - [gmx-users] pdb2gmx  ffG43a1 force field
 
Justin Lemkul
 - [gmx-users] performance 1 gpu
 
Johnny Lu
 - [gmx-users] performance 1 gpu
 
Mark Abraham
 - [gmx-users] Performance degradation for Verlet cutoff-scheme	compared to group
 
Олег Титов
 - [gmx-users] Performance degradation for Verlet cutoff-scheme compared to group
 
Mark Abraham
 - [gmx-users] Performance degradation for Verlet cutoff-scheme compared to group
 
Олег Титов
 - [gmx-users] Performance degradation for Verlet cutoff-scheme compared to group
 
Mark Abraham
 - [gmx-users] Performance degradation for Verlet cutoff-scheme compared to group
 
Dr. Vitaly Chaban
 - [gmx-users] Performance degradation for Verlet cutoff-scheme compared to group
 
Олег Титов
 - [gmx-users] Performance degradation for Verlet cutoff-scheme compared to group
 
Szilárd Páll
 - [gmx-users] Performance degradation for Verlet cutoff-scheme compared to group
 
Олег Титов
 - [gmx-users] Performance of GTX 980 and 970
 
Pappu Kumar
 - [gmx-users] Performance of GTX 980 and 970
 
Szilárd Páll
 - [gmx-users] PMF Profiles using Free Energy Perturbation(FEP) method.
 
Kim Q Hwan
 - [gmx-users] Polarisable (hydronium and hydroxide) model compatible with graphene?
 
Kester Wong
 - [gmx-users] Polymer parameter
 
Lovika Moudgil
 - [gmx-users] Polymer parameter
 
Justin Lemkul
 - [gmx-users] Pres-XX and Pres-YY difference
 
Johnny Lu
 - [gmx-users] Pres-XX and Pres-YY difference
 
Johnny Lu
 - [gmx-users] Pres-XX and Pres-YY difference
 
Johnny Lu
 - [gmx-users] Pressure coupling and liquid crystals
 
Todor Antonijevic
 - [gmx-users] Pressure coupling and liquid crystals
 
André Farias de Moura
 - [gmx-users] Pressure coupling and liquid crystals
 
Dr. Vitaly Chaban
 - [gmx-users] Pressure coupling and liquid crystals
 
Todor Antonijevic
 - [gmx-users] pressure dependence on volume.
 
Johnny Lu
 - [gmx-users] pressure dependence on volume.
 
Johnny Lu
 - [gmx-users] pressure dependence on volume.
 
Justin Lemkul
 - [gmx-users] pressure dependence on volume.
 
Johnny Lu
 - [gmx-users] pressure dependence on volume.
 
Dr. Vitaly Chaban
 - [gmx-users] pressure dependence on volume.
 
Tsjerk Wassenaar
 - [gmx-users] pressure dependence on volume.
 
Johnny Lu
 - [gmx-users] pressure dependence on volume.
 
Johnny Lu
 - [gmx-users] pressure dependence on volume.
 
Johnny Lu
 - [gmx-users] pressure dependence on volume.
 
Johnny Lu
 - [gmx-users] pressure dependence on volume.
 
Johnny Lu
 - [gmx-users] pressure dependence on volume.
 
Tsjerk Wassenaar
 - [gmx-users] pressure dependence on volume.
 
Johnny Lu
 - [gmx-users] pressure dependence on volume.
 
Johnny Lu
 - [gmx-users] pressure dependence on volume.
 
Johnny Lu
 - [gmx-users] pressure dependence on volume.
 
Mark Abraham
 - [gmx-users] pressure dependence on volume.
 
Dr. Vitaly Chaban
 - [gmx-users] pressure dependence on volume.
 
Johnny Lu
 - [gmx-users] Pressure drop and atomic acceleration in nano-channel
 
朱文鹏
 - [gmx-users] Problem implementing REST
 
carlo martinotti
 - [gmx-users] Problem implementing REST
 
Mark Abraham
 - [gmx-users] Problem implementing REST
 
carlo martinotti
 - [gmx-users] Problem implementing REST
 
Mark Abraham
 - [gmx-users] Problem with constraints in NVT calculations.
 
Kester Wong
 - [gmx-users] Problem with constraints in NVT calculations.
 
Justin Lemkul
 - [gmx-users] Problem with constraints in NVT calculations.
 
Kester Wong
 - [gmx-users] Problem with constraints in NVT calculations.
 
Justin Lemkul
 - [gmx-users] Problem with constraints in NVT calculations.
 
Kester Wong
 - [gmx-users] Problem with constraints in NVT calculations.
 
Justin Lemkul
 - [gmx-users] Problem with constraints in NVT calculations.
 
Kester Wong
 - [gmx-users] Problem with constraints in NVT calculations.
 
Justin Lemkul
 - [gmx-users] Problem with constraints in NVT calculations.
 
Kester Wong
 - [gmx-users] Problem with constraints in NVT calculations.
 
Justin Lemkul
 - [gmx-users] pseudo-random algorithm
 
Johnny Lu
 - [gmx-users] pseudo-random algorithm
 
Roland Schulz
 - [gmx-users] Query of RMSD results
 
Sainitin Donakonda
 - [gmx-users] Query of RMSD results
 
Smith, Micholas D.
 - [gmx-users] Query of RMSD results
 
Sainitin Donakonda
 - [gmx-users] Query of RMSD results
 
Justin Lemkul
 - [gmx-users] Question
 
Eric Smoll
 - [gmx-users] Question
 
Justin Lemkul
 - [gmx-users] Question
 
Eric Smoll
 - [gmx-users] Question about "Walls"
 
ramon
 - [gmx-users] question about topologies
 
Marcello Cammarata
 - [gmx-users] question about topologies
 
Justin Lemkul
 - [gmx-users] question about torsional potential fitting
 
Victor Rosas Garcia
 - [gmx-users] question about torsional potential fitting
 
André Farias de Moura
 - [gmx-users] question about torsional potential fitting
 
Victor Rosas Garcia
 - [gmx-users] question about walls for a simple water box
 
ramon
 - [gmx-users] question about walls for a simple water box
 
Urszula Uciechowska
 - [gmx-users] R: Re: R: Re: User tabulated potentials with cutoff-scheme = verlet, GROMACS 5.0.1 and 5.0.2
 
Francesco Mambretti
 - [gmx-users] R: Re: R: Re: User tabulated potentials with cutoff-scheme = verlet, GROMACS 5.0.1 and 5.0.2
 
Mark Abraham
 - [gmx-users] R: Re: User tabulated potentials with cutoff-scheme = verlet, GROMACS 5.0.1 and 5.0.2
 
Francesco Mambretti
 - [gmx-users] R: Re: User tabulated potentials with cutoff-scheme = verlet, GROMACS 5.0.1 and 5.0.2
 
Mark Abraham
 - [gmx-users] RB dihedral performance greatly improved! [was: Re: GPU waits for CPU, any remedies?]
 
Szilárd Páll
 - [gmx-users] Redirecting trajectories from one gmx module to	another
 
Mark Abraham
 - [gmx-users] Redirecting trajectories from one gmx module to another
 
Machtens, Jan-Philipp
 - [gmx-users] regarding confout.gro
 
RINU KHATTRI
 - [gmx-users] regarding confout.gro
 
Justin Lemkul
 - [gmx-users] regarding confout.gro
 
RINU KHATTRI
 - [gmx-users] regarding confout.gro
 
Justin Lemkul
 - [gmx-users] regarding generation of a topology file using Topolbuild
 
Sahithya S Iyer
 - [gmx-users] regarding generation of a topology file using Topolbuild
 
Bruce D. Ray
 - [gmx-users] regarding GROMACS Tutorial KALP15 in DPPC
 
Anurag Dobhal
 - [gmx-users] regarding GROMACS Tutorial KALP15 in DPPC
 
Justin Lemkul
 - [gmx-users] regarding GROMACS Tutorial KALP15 in DPPC
 
Anurag Dobhal
 - [gmx-users] regarding GROMACS Tutorial KALP15 in DPPC
 
Justin Lemkul
 - [gmx-users] regarding GROMACS Tutorial KALP15 in DPPC
 
Anurag Dobhal
 - [gmx-users] regarding GROMACS Tutorial KALP15 in DPPC
 
Anurag Dobhal
 - [gmx-users] regarding GROMACS Tutorial KALP15 in DPPC
 
Justin Lemkul
 - [gmx-users] regarding GROMACS Tutorial KALP15 in DPPC
 
Justin Lemkul
 - [gmx-users] regarding GROMACS Tutorial KALP15 in DPPC
 
Anurag Dobhal
 - [gmx-users] Regarding msd
 
pratibha kapoor
 - [gmx-users] Regarding msd
 
pratibha kapoor
 - [gmx-users] Regarding msd
 
rajat desikan
 - [gmx-users] Regarding msd
 
Justin Lemkul
 - [gmx-users] Regarding msd
 
rajat desikan
 - [gmx-users] Regarding spatial distribution data analysis
 
Venkat Reddy
 - [gmx-users] Regarding the Pi-Pi and pi-cation interaction
 
rama david
 - [gmx-users] Regarding the Pi-Pi and pi-cation interaction
 
Ivan Gladich
 - [gmx-users] Regarding the Pi-Pi and pi-cation interaction
 
rama david
 - [gmx-users] Regarding the Pi-Pi and pi-cation interaction
 
Justin Lemkul
 - [gmx-users] Regarding the Pi-Pi and pi-cation interaction
 
Justin Lemkul
 - [gmx-users] Regarding the Pi-Pi and pi-cation interaction
 
rama david
 - [gmx-users] Regarding the Pi-Pi and pi-cation interaction
 
Ivan Gladich
 - [gmx-users] Regarding the Pi-Pi and pi-cation interaction
 
Justin Lemkul
 - [gmx-users] Regarding the Pi-Pi and pi-cation interaction
 
Dr. Vitaly Chaban
 - [gmx-users] Regarding umbrella samplling
 
Sathish Kumar
 - [gmx-users] Regarding umbrella samplling
 
Johnny Lu
 - [gmx-users] Regarding umbrella samplling
 
Dr. Vitaly Chaban
 - [gmx-users] Regarding umbrella samplling
 
Sathish Kumar
 - [gmx-users] Regarding umbrella samplling
 
Sathish Kumar
 - [gmx-users] Regarding umbrella samplling
 
Justin Lemkul
 - [gmx-users] Regarding umbrella samplling
 
Sathish Kumar
 - [gmx-users] Regarding umbrella samplling
 
Sathish Kumar
 - [gmx-users] Regarding umbrella samplling
 
Justin Lemkul
 - [gmx-users] retaining the active site water molecules in the	protein -reg
 
venkatesh s
 - [gmx-users] retaining the active site water molecules in the protein -reg
 
Justin Lemkul
 - [gmx-users] run g-msd using more than one core
 
Xiaobin Cao
 - [gmx-users] run g-msd using more than one core
 
Justin Lemkul
 - [gmx-users] Running free energy tutorial for ionic molecules
 
vivek sharma
 - [gmx-users] Running jobs between different Gromacs versions
 
Mustafa TEKPINAR
 - [gmx-users] Running jobs between different Gromacs versions
 
David van der Spoel
 - [gmx-users] Running jobs between different Gromacs versions
 
Tsjerk Wassenaar
 - [gmx-users] same input tpr same results?
 
Albert
 - [gmx-users] same input tpr same results?
 
Mark Abraham
 - [gmx-users] Segmentation fault
 
Vo Cam Quy
 - [gmx-users] Segmentation fault
 
Justin Lemkul
 - [gmx-users] Segmentation fault while diagonalizing covariance matrix using g_covar
 
Mendez Giraldez, Raul
 - [gmx-users] Segmentation fault while diagonalizing covariance matrix using g_covar
 
Mark Abraham
 - [gmx-users] Selecting box dimension and COM position - Pull Code
 
Agnivo Gosai
 - [gmx-users] Selecting box dimension and COM position - Pull Code
 
Justin Lemkul
 - [gmx-users] Silica monolayer with Martini force field
 
RAMON REIGADA SANZ
 - [gmx-users] Silica monolayer with Martini force field
 
André Farias de Moura
 - [gmx-users] Silica monolayer with Martini force field
 
Dr. Vitaly Chaban
 - [gmx-users] Silica monolayer with Martini force field
 
André Farias de Moura
 - [gmx-users] Simulating Multiple Solute Particles
 
Nathan K Houtz
 - [gmx-users] Simulating Multiple Solute Particles
 
Mark Abraham
 - [gmx-users] Simulating Multiple Solute Particles
 
Dr. Vitaly Chaban
 - [gmx-users] Simulating Multiple Solute Particles
 
Nathan K Houtz
 - [gmx-users] Simulating Multiple Solute Particles
 
Justin Lemkul
 - [gmx-users] Simulation Crash
 
Udaya Dahal
 - [gmx-users] source cord routines for electric fields
 
米谷慎
 - [gmx-users] source cord routines for electric fields
 
David van der Spoel
 - [gmx-users] source cord routines for electric fields
 
Makoto Yoneya
 - [gmx-users] source cord routines for electric fields
 
Makoto Yoneya
 - [gmx-users] source cord routines for electric fields
 
Makoto Yoneya
 - [gmx-users] Spacial density map
 
Stella Nickerson
 - [gmx-users] Spacial density map
 
Dallas Warren
 - [gmx-users] Spacial density map
 
andrea spitaleri
 - [gmx-users] SR and 14 terms for LJ and Coulomb interactions
 
Turgay Cakmak
 - [gmx-users] SR and 14 terms for LJ and Coulomb interactions
 
Mark Abraham
 - [gmx-users] Static structure factor
 
Francesco Mambretti
 - [gmx-users] Suggestion for Umbrella sampling and CAS
 
rama david
 - [gmx-users] Suggestion on Simple protocol for MD..
 
rama david
 - [gmx-users] Suggestion on Umbrella sampling and peptide design
 
rama david
 - [gmx-users] Suggestion on Umbrella sampling and peptide synthesis
 
rama david
 - [gmx-users] SWM4-NDP force field
 
Kester Wong
 - [gmx-users] SWM4-NDP force field
 
Dr. Vitaly Chaban
 - [gmx-users] SWM4-NDP force field
 
Kester Wong
 - [gmx-users] SWM4-NDP force field
 
Dr. Vitaly Chaban
 - [gmx-users] tail correction in surface tension
 
Yu, Decai
 - [gmx-users] The flat-bottomed position restrain in the topolgy file
 
liuyong_1007 at dicp.ac.cn
 - [gmx-users] The flat-bottomed position restrain in the topolgy file
 
Justin Lemkul
 - [gmx-users] The last line in a .gro file
 
Agnivo Gosai
 - [gmx-users] The last line in a .gro file
 
Mark Abraham
 - [gmx-users] The last line in a .gro file
 
Tsjerk Wassenaar
 - [gmx-users] Time averaged ramachandran plot
 
Sanku M
 - [gmx-users] Time averaged ramachandran plot
 
Justin Lemkul
 - [gmx-users] Time averaged ramachandran plot
 
andrea
 - [gmx-users] Time averaged ramachandran plot
 
andrea
 - [gmx-users] Time averaged ramachandran plot
 
Tsjerk Wassenaar
 - [gmx-users] To:	gmx users p
 
David de Sancho
 - [gmx-users] TPI calculation in desired coordinates
 
Kim Q Hwan
 - [gmx-users] TPI calculation in desired coordinates
 
João M. Damas
 - [gmx-users] TPI calculation in desired coordinates
 
Kim Q Hwan
 - [gmx-users] trjcat
 
Eric Smoll
 - [gmx-users] trjcat
 
Tsjerk Wassenaar
 - [gmx-users] trjcat
 
Naga Rajesh Tummala
 - [gmx-users] trjcat
 
Eric Smoll
 - [gmx-users] trjcat
 
Tsjerk Wassenaar
 - [gmx-users] trjconv gets stuck on frame
 
Eric Smoll
 - [gmx-users] trjconv gets stuck on frame
 
Mark Abraham
 - [gmx-users] trjconv gets stuck on frame
 
Eric Smoll
 - [gmx-users] trjconv gets stuck on frame
 
Mark Abraham
 - [gmx-users] trjconv gets stuck on frame
 
Eric Smoll
 - [gmx-users] trjconv gets stuck on frame
 
Mark Abraham
 - [gmx-users] Turning off electrostatic interactions between two	proteins
 
Ozlem Ulucan
 - [gmx-users] TWO AMINOACIDS WITH SAME NUMBER IN .GRO FILE
 
Michetti Davide
 - [gmx-users] TWO AMINOACIDS WITH SAME NUMBER IN .GRO FILE
 
Justin Lemkul
 - [gmx-users] Umbrella Sampling tutorial by Dr. Justin Lemkul
 
Agnivo Gosai
 - [gmx-users] Umbrella Sampling tutorial by Dr. Justin Lemkul
 
Justin Lemkul
 - [gmx-users] Understanding comments in pdb2gmx output
 
Agnivo Gosai
 - [gmx-users] Understanding comments in pdb2gmx output
 
Johnny Lu
 - [gmx-users] Understanding comments in pdb2gmx output
 
Justin Lemkul
 - [gmx-users] Understanding comments in pdb2gmx output
 
Agnivo Gosai
 - [gmx-users] Understanding comments in pdb2gmx output
 
Justin Lemkul
 - [gmx-users] Understanding comments in pdb2gmx output
 
Mark Abraham
 - [gmx-users] Understanding g_energy output in GROMACS 4.5.7
 
Agnivo Gosai
 - [gmx-users] Understanding g_energy output in GROMACS 4.5.7
 
Justin Lemkul
 - [gmx-users] Understanding the results of NVT simulation
 
Agnivo Gosai
 - [gmx-users] Understanding the results of NVT simulation
 
Dr. Vitaly Chaban
 - [gmx-users] Understanding the results of NVT simulation
 
Dallas Warren
 - [gmx-users] Unstable system [was: (no subject)]
 
Justin Lemkul
 - [gmx-users] Unstable system [was: (no subject)]
 
Padmani Sandhu
 - [gmx-users] Unstable system [was: (no subject)]
 
Justin Lemkul
 - [gmx-users] Unstable system [was: (no subject)]
 
Padmani Sandhu
 - [gmx-users] Unstable system [was: (no subject)]
 
Justin Lemkul
 - [gmx-users] Use NVT to mimic NVE
 
Johnny Lu
 - [gmx-users] Use NVT to mimic NVE
 
Johnny Lu
 - [gmx-users] Use NVT to mimic NVE
 
Mark Abraham
 - [gmx-users] Use NVT to mimic NVE
 
Antonio Baptista
 - [gmx-users] Use NVT to mimic NVE
 
Dr. Vitaly Chaban
 - [gmx-users] Use NVT to mimic NVE
 
Michael Shirts
 - [gmx-users] Use NVT to mimic NVE
 
Johnny Lu
 - [gmx-users] Use NVT to mimic NVE
 
Antonio Baptista
 - [gmx-users] Use NVT to mimic NVE
 
Dr. Vitaly Chaban
 - [gmx-users] Use NVT to mimic NVE
 
Johnny Lu
 - [gmx-users] Use NVT to mimic NVE
 
Dr. Vitaly Chaban
 - [gmx-users] Use NVT to mimic NVE
 
Johnny Lu
 - [gmx-users] Use NVT to mimic NVE
 
Dr. Vitaly Chaban
 - [gmx-users] Use NVT to mimic NVE
 
Johnny Lu
 - [gmx-users] Use NVT to mimic NVE
 
Dr. Vitaly Chaban
 - [gmx-users] Use NVT to mimic NVE
 
Dr. Vitaly Chaban
 - [gmx-users] Use NVT to mimic NVE
 
Johnny Lu
 - [gmx-users] Use NVT to mimic NVE
 
David van der Spoel
 - [gmx-users] Use NVT to mimic NVE
 
Dr. Vitaly Chaban
 - [gmx-users] Use NVT to mimic NVE
 
Michael Shirts
 - [gmx-users] Use NVT to mimic NVE
 
Johnny Lu
 - [gmx-users] Use NVT to mimic NVE
 
Johnny Lu
 - [gmx-users] Use NVT to mimic NVE
 
Michael Shirts
 - [gmx-users] Use NVT to mimic NVE
 
Johnny Lu
 - [gmx-users] Use NVT to mimic NVE
 
Johnny Lu
 - [gmx-users] Use NVT to mimic NVE
 
Johnny Lu
 - [gmx-users] Use NVT to mimic NVE
 
Michael Shirts
 - [gmx-users] Use NVT to mimic NVE
 
Johnny Lu
 - [gmx-users] Use NVT to mimic NVE
 
Johnny Lu
 - [gmx-users] Use NVT to mimic NVE
 
Mark Abraham
 - [gmx-users] Use NVT to mimic NVE
 
Johnny Lu
 - [gmx-users] Use NVT to mimic NVE
 
Johnny Lu
 - [gmx-users] use of Walls in Martini simulations
 
Ramon Reigada
 - [gmx-users] use of Walls in Martini simulations
 
HANNIBAL LECTER
 - [gmx-users] User tabulated potentials with cutoff-scheme = verlet,	GROMACS 5.0.1 and 5.0.2
 
Francesco Mambretti
 - [gmx-users] User tabulated potentials with cutoff-scheme = verlet, GROMACS 5.0.1 and 5.0.2
 
Mirco Wahab
 - [gmx-users] User tabulated potentials with cutoff-scheme = verlet, GROMACS 5.0.1 and 5.0.2
 
Mark Abraham
 - [gmx-users] Using Gpus on multiple nodes. (Feature #1591)
 
Siva Dasetty
 - [gmx-users] Using Gpus on multiple nodes. (Feature #1591)
 
Mark Abraham
 - [gmx-users] Using Gpus on multiple nodes. (Feature #1591)
 
Siva Dasetty
 - [gmx-users] Using Gpus on multiple nodes. (Feature #1591)
 
Trayder Thomas
 - [gmx-users] Using make_ndx to couple molecules before pulling	simulation
 
Agnivo Gosai
 - [gmx-users] Using make_ndx to couple molecules before pulling simulation
 
Justin Lemkul
 - [gmx-users] v-rescale fatal error
 
Kester Wong
 - [gmx-users] v-rescale fatal error
 
Mark Abraham
 - [gmx-users] v-rescale fatal error
 
Kester Wong
 - [gmx-users] v-rescale fatal error
 
Justin Lemkul
 - [gmx-users] v-rescale fatal error
 
Kester Wong
 - [gmx-users] v-rescale fatal error
 
Mark Abraham
 - [gmx-users] v-rescale fatal error
 
Kester Wong
 - [gmx-users] Velocity Verlet integrator
 
Mario Fernández Pendás
 - [gmx-users] Velocity Verlet integrator
 
Justin Lemkul
 - [gmx-users] Velocity Verlet integrator
 
Mario Fernández Pendás
 - [gmx-users] Velocity Verlet integrator
 
Michael Shirts
 - [gmx-users] Velocity Verlet integrator
 
Mario Fernández Pendás
 - [gmx-users] Velocity Verlet integrator
 
Michael Shirts
 - [gmx-users] Velocity Verlet integrator
 
Mario Fernández Pendás
 - [gmx-users] Version 12
 
lloyd riggs
 - [gmx-users] Version 12
 
Mark Abraham
 - [gmx-users] webpage for searching gromacs mailing archive
 
Sanku M
 - [gmx-users] webpage for searching gromacs mailing archive
 
Justin Lemkul
 - [gmx-users] Why should I repeat my simulation?
 
fatemeh ramezani
 - [gmx-users] Why should I repeat my simulation?
 
Justin Lemkul
 - [gmx-users] Why should I repeat my simulation?
 
massimo sandal
 - [gmx-users] Why should I repeat my simulation?
 
João M. Damas
 - [gmx-users] Why should I repeat my simulation?
 
Dr. Vitaly Chaban
 - [gmx-users] why the gas ethanol system has positive potential?
 
David van der Spoel
 - [gmx-users] why the gas ethanol system has positive potential?
 
Tsjerk Wassenaar
    
 
    
      Last message date: 
       Fri Oct 31 21:38:06 CET 2014
    Archived on: Fri Oct 31 21:38:07 CET 2014
    
   
     
     
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