[gmx-users] Use NVT to mimic NVE
Johnny Lu
johnny.lu128 at gmail.com
Sun Oct 12 16:53:10 CEST 2014
Firstly, what are the possible errors/artifacts caused by masking "the
energy leakage problem with the thermostat" in this case?
Secondly, are there any other mdp setting that I can try to make the mixed
precision gromacs NVE run have conserved energy over 100 ns ? (and... is it
because of some errors that I made in my systems that make the NVE run not
conserved in energy?)
The NVE has the following statistics.
Statistics over 2747281 steps [ 0.0000 through 1373.6400 ps ], 4 data sets
All statistics are over 274729 points
Energy Average Err.Est. RMSD Tot-Drift
-------------------------------------------------------------------------------
Disper. corr. -3961.13 0 0 2.60178e-09
(kJ/mol)
Total Energy -309939 160 337.76 478.828
(kJ/mol)
Temperature 300.292 0.24 1.49289 0.631428 (K)
Pressure -64.5409 4.7 148.779 25.1326 (bar)
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