[gmx-users] Regarding umbrella samplling

[Justin Lemkul]

On 10/13/14 1:08 PM, Sathish Kumar wrote:
> I am not able to find wheather the windows are overlaped or not. Please
> help me in this.
>

You've got a gap in the sampling exactly where g_wham tells you.  The histograms 
show this.  You either need more windows or a different force constant, or both. 
  The simplest solution is to add some more windows where you're lacking sampling.

-Justin

-- 
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Justin A. Lemkul, Ph.D.
Ruth L. Kirschstein NRSA Postdoctoral Fellow

Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 601
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201

jalemkul at outerbanks.umaryland.edu | (410) 706-7441
http://mackerell.umaryland.edu/~jalemkul

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