[gmx-users] grompp Segmentation fault

Justin Lemkul jalemkul at vt.edu
Tue Oct 14 13:54:51 CEST 2014



On 10/13/14 10:42 PM, Nilesh Dhumal wrote:
> hello,
>
> I running grompp for simulation. I get Segmentation fault error.
>
> grompp -f 600.mdp -c cu.gro -p  cu_btc_1.top -o 1.tpr
>
>
> checking input for internal consistency...
> processing topology...
> Segmentation fault
>
>
> Could any one tell what is the problem?
>

Not without a full debugging back trace.  Seg faults are generic memory errors; 
there's nothing at all that can be diagnosed from this message alone.

-Justin

-- 
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Justin A. Lemkul, Ph.D.
Ruth L. Kirschstein NRSA Postdoctoral Fellow

Department of Pharmaceutical Sciences
School of Pharmacy
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University of Maryland, Baltimore
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Baltimore, MD 21201

jalemkul at outerbanks.umaryland.edu | (410) 706-7441
http://mackerell.umaryland.edu/~jalemkul

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