[gmx-users] CMake Error when installing Gromacs 5.0.7

[Mark Abraham]

Hi,

Don't install into the build tree. Install somewhere you want the software
to live permanently... Or leave it as the default of /usr/local/

Mark

On Tue, 15 Dec 2015 08:10 朱文鹏 <jasonzhu925 at gmail.com> wrote:

> Dear all,
>
> I encountered a problem when I tried to install Gromacs 5.0.7 by using
> CMake. The CMake error is about the CMake command "tmpi_get_source_list".
>
> CMake Error at gromacs/CMakeLists.txt:114 (tmpi_get_source_list):
>   Unknown CMake command "tmpi_get_source_list".
>
> I tried different version of CMake (2.8.12 and 3.2.2). But they didn't
> work. Is there anyone who have the same problem during configuration and
> know how to solve it? I appreciate any suggestions from you. BTW, I
> successfully installed Gromacs 4.6.7 on the same environment and didn't
> have this problem.
>
> The configuration I use for CMake is:
> CC=mpicc CXX=mpicxx cmake ../ -DCMAKE_C_COMPILER=mpicc
> -DCMAKE_CXX_COMPILER=mpicxx -DGMX_X11=OFF -DGMX_MPI=ON
> -DGMX_FFT_LIBRARY=fftw -DCMAKE_INCLUDE_PATH=/users/yli/fftw-3.3.4/include
> -DCMAKE_LIBRARY_PATH=/users/yli/fftw-3.3.4/lib
> -DCMAKE_INSTALL_PREFIX=/users/yli/gromacs-5.0.7/src/build
>
>
> The log of configuration is shown as below:
> ===========================
> -- The C compiler identification is Intel 14.0.0.20131008
> -- The CXX compiler identification is Intel 14.0.0.20131008
> -- Check for working C compiler:
> /gpfs/runtime/opt/mvapich2/2.2a-intel/bin/mpicc
> -- Check for working C compiler:
> /gpfs/runtime/opt/mvapich2/2.2a-intel/bin/mpicc -- works
> -- Detecting C compiler ABI info
> -- Detecting C compiler ABI info - done
> -- Check for working CXX compiler:
> /gpfs/runtime/opt/mvapich2/2.2a-intel/bin/mpicxx
> -- Check for working CXX compiler:
> /gpfs/runtime/opt/mvapich2/2.2a-intel/bin/mpicxx -- works
> -- Detecting CXX compiler ABI info
> -- Detecting CXX compiler ABI info - done
> CMake Error at gromacs/CMakeLists.txt:114 (tmpi_get_source_list):
>   Unknown CMake command "tmpi_get_source_list".
>
>
> CMake Warning (dev) in CMakeLists.txt:
>   No cmake_minimum_required command is present.  A line of code such as
>
>     cmake_minimum_required(VERSION 2.8)
>
>   should be added at the top of the file.  The version specified may be
> lower
>   if you wish to support older CMake versions for this project.  For more
>   information run "cmake --help-policy CMP0000".
> This warning is for project developers.  Use -Wno-dev to suppress it.
>
> -- Configuring incomplete, errors occurred!
> See also "/users/yli/gromacs-5.0.7/src/build/CMakeFiles/CMakeOutput.log".
> ===============================================
>
> Best,
> Jason
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