[gmx-users] MD on protein-RNA complex

[Brett]

Dear Justin,
 
What do you mean for "Multi-chain and heterogeneous systems work out of the box"?
 
I am looking forward to getting your reply.
 
Brett





At 2015-03-04 10:50:10, "Justin Lemkul" <jalemkul at vt.edu> wrote:
>
>
>On 3/3/15 9:34 PM, Brett wrote:
>> Dear Justin,
>>
>>
>> I mean is any difficulty or special for gromacs to recognize the RNA in the PDB file?
>>
>
>Multi-chain and heterogeneous systems work out of the box.  As with anything, 
>the force field has to support everything and the nomenclature has to match the 
>force field's expectations, but pdb2gmx will take care of everything.
>
>-Justin
>
>-- 
>==================================================
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>Justin A. Lemkul, Ph.D.
>Ruth L. Kirschstein NRSA Postdoctoral Fellow
>
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