[gmx-users] trjorder

[Natalia Alveal F.]

Dear gmx-users,
i trying to calculate the number of water through the pore, but i dont
understand how works trjorder, if calculate the molecules more closest to a
reference group, in the second frame print other molecules or works with
the molecules calculated in the first frame to be ordered?. Specially, i
need to count the number of molecules in a particular region through the
simulation time.
Thanks in advance.
Natalia

-- 
Natalia Alveal Fuentealba
Ingeniera en Bioinformática
Laboratory of Membranes Proteins Structure and Signalling
Departamento de Fisiología
Pontificia Universidad Católica de Chile
Alameda 340, Santiago, Chile
Fono: 56-2-3542877