[gmx-users] Invalid order for directive atomtypes-
Atila Petrosian
atila.petrosian at gmail.com
Fri Sep 4 20:30:17 CEST 2015
Dear Justin,
Thanks for you quick answer,
I checked the your suggested link.
these new types and their associated parameters must appear before any
[moleculetype] directive.
In my lig.itp file, [ atomtypes ] appeared before [ moleculetype ]
directive.
[ atomtypes ]
;name bond_type mass charge ptype sigma epsilon
h1 h1 0.0000 0.0000 A 2.47135e-01 6.56888e-02
c3 c3 0.0000 0.0000 A 3.39967e-01 4.57730e-01
ha ha 0.0000 0.0000 A 2.59964e-01 6.27600e-02
ca ca 0.0000 0.0000 A 3.39967e-01 3.59824e-01
os os 0.0000 0.0000 A 3.00001e-01 7.11280e-01
ho ho 0.0000 0.0000 A 0.00000e+00 0.00000e+00
hc hc 0.0000 0.0000 A 2.64953e-01 6.56888e-02
c c 0.0000 0.0000 A 3.39967e-01 3.59824e-01
oh oh 0.0000 0.0000 A 3.06647e-01 8.80314e-01
o o 0.0000 0.0000 A 2.95992e-01 8.78640e-01
[ moleculetype ]
; Name nrexcl
solute 3
Why I encountered with error?
Best,
Atila
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