[gmx-users] 1. peptide, lipid simulation (badamkhatan togoldor)

Theoretical Research research at fonscientia.com
Thu Sep 24 13:26:02 CEST 2015


Please add the following lines in the topol.top

; Include forcefield parameters

#include "charmm27.fff/forcefield.itp"


; Include GP paramters

#include "charmm27.ff/gb.itp"


Try this out


Regards


CS


On Sep 24, 2015 3:30 PM, <gromacs.org_gmx-users-request at maillist.sys.kth.se>
wrote:

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>    1. peptide, lipid simulation (badamkhatan togoldor)
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> Message: 1
> Date: Thu, 24 Sep 2015 08:10:07 +0000 (UTC)
> From: badamkhatan togoldor <bdmkhtn at yahoo.com>
> To: "gmx-users at gromacs.org" <gmx-users at gromacs.org>
> Subject: [gmx-users] peptide, lipid simulation
> Message-ID:
>         <1870426864.220194.1443082207435.JavaMail.yahoo at mail.yahoo.com>
> Content-Type: text/plain; charset=UTF-8
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>
> Hi,i?m following KALP-15 in DPPC tut in my own peptide (novel) and lipid
> (pope).?I created charm27_lipid.ff for my lipid. In this case i should
> create for such ff to my lipid or it?s necessary to create??Then its gave
> me fatal error on grommpTopology include file "gb.itp" not foundWhere i
> have to put this file??Any help and suggestion highly appreciate!
> Badamkhatan Tuguldur
>
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