[gmx-users] calculate change in delta G of folding due to mutation
Tushar Ranjan Moharana
tusharranjanmoharana at gmail.com
Tue Apr 19 11:35:09 CEST 2016
Hi all,
I want to calculate change in delta G of folding due to mutation. I found a
nice tutorial at:
http://www3.mpibpc.mpg.de/groups/de_groot/cecam2015/peptide_mutation/
But after completion I got everything 0.
Calculating the integral using the trapezium rule
Integral 1 0.00000 +/- 0.00000
std. dev. relative deviation of
standard --------- cumulants from those of
set average deviation sqrt(n-1) a Gaussian distribition
cum. 3 cum. 4
SS1 0.000000e+00 0.000000e+00 0.000000e+00 0.000 0.000
in my .xvg file Y axis is completely 0 (X axis is time). The mutations
predicted by Rosetta showed 70 REU improvement. I think I am going
somewhere wrong.
It will be a great help if someone can help me in finding my mistake.
Thanks a lot.
"A society with free knowledge is better than a society with free food"
Tushar Ranjan Moharana
B. Tech, NIT Warangal
Ph D Student, CCMB
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