[gmx-users] Installation Problem... No command 'gmx' found

[Sotirios Dionysios I. Papadatos]

Hi, in my case gmx is only needed for certain commands. For example pdb2gmx is working if I use it solo, not with gmx. It's worth a shot.

________________________________________
From: gromacs.org_gmx-users-bounces at maillist.sys.kth.se <gromacs.org_gmx-users-bounces at maillist.sys.kth.se> on behalf of Email Gmail Pribadi <hus3nr at gmail.com>
Sent: Thursday, April 21, 2016 9:18 AM
To: gmx-users at gromacs.org
Subject: Re: [gmx-users] Installation Problem... No command 'gmx' found

Hi,

Try gmx [command] . Ex. gmx mdrun -option

Regards,


Husen

> On 21 Apr 2016, at 12.31, terrencesun at gmail.com wrote:
>
> Hi,
>
> Try gmx_mpi.
>
> Regards
> Terry
>
>
>> On 21 Apr 2016, at 12:11 PM, Md. Imrul Reza Shishir <imrul.reza.shishir at gmail.com> wrote:
>>
>> Dear all user
>>
>> I install gromacs in my laptop its perfectly ok. But i have problem to
>> install in my desktop there i face problem.
>> In my desktop i want to compile with cuda accelerator and MPI option. I
>> install successfully openmpi-1.10.2 and cuda-7.5 with nvidia driver. all
>> this driver is ok.
>>
>> For gromacs i run this installation command.
>>
>> tar -xzvf gromacs-5.1.2.tar.gz
>> cd gromacs-5.1.2.tar.gz
>> mkdir build
>> cd build
>> CMAKE <gromacs-5.1.2 file location > -DGMX_BUILD_OWN_FFTW=on -DGMX_GPU=on
>> -DGMX_MPI=on -DREGRESSIONTEST_DOWNLOAD=on
>> make -j16
>> make check
>> sudo make install -j16
>>
>> source /usr/local/gromacs/bin/GMXRC
>>
>> In the installation procedure i dont find any error. All 26 test completed
>> without error.
>>
>> But when i try to run "gmx or gmx help"
>>
>> There is error no command gmx found. I need your guidance.
>>
>> Best Regards
>>
>> --
>> *Md Imrul Reza Shishir*
>> --
>> Gromacs Users mailing list
>>
>> * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting!
>>
>> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
>>
>> * For (un)subscribe requests visit
>> https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-request at gromacs.org.
> --
> Gromacs Users mailing list
>
> * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting!
>
> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
>
> * For (un)subscribe requests visit
> https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-request at gromacs.org.
--
Gromacs Users mailing list

* Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting!

* Can't post? Read http://www.gromacs.org/Support/Mailing_Lists

* For (un)subscribe requests visit
https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-request at gromacs.org.