[gmx-users] Error in mdrun
Roshan Shrestha
roshanpra at gmail.com
Sun Apr 24 13:15:33 CEST 2016
My CPU configuration is rather too old,
Architecture: i686
CPU op-mode(s): 32-bit, 64-bit
Byte Order: Little Endian
CPU(s): 2
On-line CPU(s) list: 0,1
Thread(s) per core: 1
Core(s) per socket: 2
Socket(s): 1
Vendor ID: GenuineIntel
CPU family: 6
Model: 15
Model name: Intel(R) Core(TM)2 Duo CPU E6750 @ 2.66GHz
Stepping: 11
CPU MHz: 2003.000
CPU max MHz: 2670.0000
CPU min MHz: 2003.0000
BogoMIPS: 5333.10
Virtualization: VT-x
L1d cache: 32K
L1i cache: 32K
L2 cache: 4096K
I installed Gromacs 5.0.6, but while running mdrun, I got the error:
Program gmx, VERSION 5.0.6
Source code file:
/build/gromacs-yTV9IQ/gromacs-5.0.6/src/gromacs/gmxlib/gmx_detect_hardware.c,
line: 212
Fatal error:
The gmx executable was compiled to use the rdtscp CPU instruction. However,
this is not supported by the current hardware and continuing would lead to
a crash. Please rebuild GROMACS with the GMX_USE_RDTSCP=OFF CMake option.
For more information and tips for troubleshooting, please check the GROMACS
website at http://www.gromacs.org/Documentation/Errors
How to solve this problem ? Thanks.
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