[gmx-users] REMD--how to determine the temperature distribution

Christopher Neale chris.neale at alum.utoronto.ca
Mon Apr 25 19:21:03 CEST 2016


There are many published approaches. Here is the one that I use: http://origami.phys.rpi.edu/racc/rate_of_acceptance.php
Another example is here: http://folding.bmc.uu.se/remd/

________________________________________
From: gromacs.org_gmx-users-bounces at maillist.sys.kth.se <gromacs.org_gmx-users-bounces at maillist.sys.kth.se> on behalf of YanhuaOuyang <15901283893 at 163.com>
Sent: 25 April 2016 10:36
To: gmx-users at gromacs.org
Subject: [gmx-users] REMD--how to determine the temperature distribution

Dear all,
        I am going to run a REMD of a protein(explicit solvent) in NVT ensemble with gromacs, but I have trouble in determining a optimum temperature  distribution.Can anybody know the ways to determine the temperature?
--
Gromacs Users mailing list

* Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting!

* Can't post? Read http://www.gromacs.org/Support/Mailing_Lists

* For (un)subscribe requests visit
https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-request at gromacs.org.


More information about the gromacs.org_gmx-users mailing list