[gmx-users] xpm matrix value

Lábas Anikó labasaniko at gmail.com
Thu Feb 4 15:32:47 CET 2016

Dear Gromacs Users,

I have just found a post from 2010 which gives solution for this problem:


2016-02-04 15:14 GMT+01:00 Lábas Anikó <labasaniko at gmail.com>:

> Dear Gromacs Users,
> I did some cluster analysis using gmx cluster with the option "-ntr",
> which generated me an image file (.xpm) containing the transition from one
> cluster to another, for each cluster pairs. This .xpm file shows the number
> of transition as a color code. Can anyone help me how can I get the value
> as a number for each transition rather than the color? For example: from
> cluster 1 to cluster 2: 17.
> Thank You in advance,
> Aniko

More information about the gromacs.org_gmx-users mailing list