[gmx-users] Installation problem

[Mark Abraham]

Hi,

As you have read in the install guide (hint, hint) CUDA and OpenCL support
are mutually exclusive. Your second attempt was clearly run in the same
build directory, so you have not changed your previous choice where OpenCL
was on. Either turn it off, change build directory, or clear the contents
of the build directory.

Mark

On Sun, 14 Feb 2016 15:46 Prof. Eddie <eackad at siue.edu> wrote:

> Thanks. I thought it would be better to have ocl as well just in case.
> However, I tried you suggestion:
> cmake .. -DGMX_BUILD_OWN_FFTW=ON -DREGRESSIONTEST_DOWNLOAD=ON ; make
> and it still have the same error
> [100%] Building C object
> src/gromacs/CMakeFiles/libgromacs.dir/utility/baseversion-gen.c.o
> Linking CXX shared library ../../lib/libgromacs.so
> [100%] Built target libgromacs
> [100%] Building CXX object
> share/template/CMakeFiles/template.dir/template.cpp.o
> Linking CXX executable ../../bin/template
> ../../lib/libgromacs.so.1.2.0: undefined reference to
> `clEnqueueBarrierWithWaitList'
> ../../lib/libgromacs.so.1.2.0: undefined reference to
> `clEnqueueMarkerWithWaitList'
> collect2: error: ld returned 1 exit status
> make[2]: *** [bin/template] Error 1
> make[1]: *** [share/template/CMakeFiles/template.dir/all] Error 2
> make: *** [all] Error 2
>
> I did a make clean first and that didn't help. Thanks for continuing to
> help,
> Eddie
>
> On Sun, Feb 14, 2016 at 7:41 AM, Dr. Eddie <eackad at gmail.com> wrote:
>
> > Thanks. I thought it would be better to have ocl as well just in case.
> > However, I tried you suggestion:
> > cmake .. -DGMX_BUILD_OWN_FFTW=ON -DREGRESSIONTEST_DOWNLOAD=ON ; make
> > and it still have the same error
> > [100%] Building C object
> > src/gromacs/CMakeFiles/libgromacs.dir/utility/baseversion-gen.c.o
> > Linking CXX shared library ../../lib/libgromacs.so
> > [100%] Built target libgromacs
> > [100%] Building CXX object
> > share/template/CMakeFiles/template.dir/template.cpp.o
> > Linking CXX executable ../../bin/template
> > ../../lib/libgromacs.so.1.2.0: undefined reference to
> > `clEnqueueBarrierWithWaitList'
> > ../../lib/libgromacs.so.1.2.0: undefined reference to
> > `clEnqueueMarkerWithWaitList'
> > collect2: error: ld returned 1 exit status
> > make[2]: *** [bin/template] Error 1
> > make[1]: *** [share/template/CMakeFiles/template.dir/all] Error 2
> > make: *** [all] Error 2
> >
> > I did a make clean first and that didn't help.
> >
> > On Sat, Feb 13, 2016 at 12:04 PM, Nikhil Maroli <scinikhil at gmail.com>
> > wrote:
> >
> >> cmake .. -DGMX_BUILD_OWN_FFTW=ON -DREGRESSIONTEST_DOWNLOAD=ON
> >>
> >>
> >>
> >> --
> >> Gromacs Users mailing list
> >>
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> >> posting!
> >>
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> >>
> >
> >
> >
> > --
> > Eddie
> >
>
>
>
> --
> _________________________________________________________
> Edward Ackad, Ph.D <http://www.siue.edu/%7Eeackad>
> Assistant Professor of Physics
> Computational Nanophotonics
> Southern Illinois University Edwardsville
> (618) 650-2390
> --
> Gromacs Users mailing list
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