[gmx-users] Help with installation of gromacs

[Sun Iba]

use
 source /usr/local/gromacs/bin/GMXRC before executing pdb2gmx

On Thu, Jul 21, 2016 at 12:36 PM, Sidra Rafi <sidrarafi89 at gmail.com> wrote:

> Dear Omamuyovwi,
>
> You have to define your path variable. you can use bash for this purpose.
> then it will work.
>
>
>
> On Wed, Jul 20, 2016 at 8:49 PM, Omamuyovwi Akemu <
> omamuyovwiakemu at yahoo.com
> > wrote:
>
> > Dear Gromacs User,  My name is Jolayemi Omamuyovwi. I am trying to
> install
> > gromacs on computer. I went through the instruction in the INSTALL file
> in
> > gromacs-5.1.2. It looked right but when I do pdb2gmx on the terminal in
> the
> > directory of my build folder just to know if if gromacs has been properly
> > installed, I get the message : The program 'pdb2gx'is currently not
> > installed.
> > Pls I am new to using the code and I really want to learn. I will
> > appreciate any comments that help solve this problem.  Thanks you.
> > Jolayemi Omamuyovwi RitaResearch Student,University of Benin,Nigeria
> >
> > Sent from Yahoo Mail on Android
> > --
> > Gromacs Users mailing list
> >
> > * Please search the archive at
> > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before
> > posting!
> >
> > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
> >
> > * For (un)subscribe requests visit
> > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or
> > send a mail to gmx-users-request at gromacs.org.
>
>
>
>
> --
>
> With best regards,
>
>
> SIDRA RAFI,
> Ph.D, Scholar
> Email: sidrarafi89 at gmail.com, sidra.rafi at iccs.edu
> www.iccs.edu/pcmd/index.php
> Dr. Panjwani Center for Molecular Medicine and Drug Research,
> International Center for Chemical and Biological Sciences,
> University of Karachi
> --
> Gromacs Users mailing list
>
> * Please search the archive at
> http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before
> posting!
>
> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
>
> * For (un)subscribe requests visit
> https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or
> send a mail to gmx-users-request at gromacs.org.
>