[gmx-users] mdrun -membed Sorry, parallel g_membed is not yet fully functional.

[-Mario]

I confirm that it worked smoothly by adding this command.
I think I guessed the role of the command -nt 1, correct me if I'm
mistaken: running on single thread avoids parallelization thus it gives no
error.

Now another great problem is that in the original study a .gro file is
supposed to be produced, but I can only see .edr and .log.
Don't know if I'm getting it wrong or something.

Thanks deeply for your  help.

-Mario


2016-07-21 23:29 GMT+02:00 -Mario <marios9.mf at gmail.com>:

> I'm trying to insert a protein in membrane using the g_membed method, even
> though this command is now integrated in MDRUN as far I understand.
> Everything's ready, but when I run the mdrun with command:
>
>   gmx mdrun -deffnm input -membed embed.dat
>
> this error message occurs:
>    Program gmx mdrun, VERSION 5.1.2
>    Source code file: /home/mario/Scaricati/gromacs-
>  5.1.2/src/programs/mdrun/membed.c, line: 1079
>
>    Input error or input inconsistency:
>    Sorry, parallel g_membed is not yet fully functional.
>    For more information and tips for troubleshooting, please check the
> GROMACS
>    website at http://www.gromacs.org/Documentation/Errors
>
> Could please someone help?
> Thanks in advance
>
> --
> *Mario Falsaperna*
>



-- 
*Mario Falsaperna*