[gmx-users] mdrun -membed Sorry, parallel g_membed is not yet fully functional.

[Justin Lemkul]

On 7/21/16 5:29 PM, -Mario wrote:
> I'm trying to insert a protein in membrane using the g_membed method, even
> though this command is now integrated in MDRUN as far I understand.
> Everything's ready, but when I run the mdrun with command:
>
>   gmx mdrun -deffnm input -membed embed.dat
>
> this error message occurs:
>    Program gmx mdrun, VERSION 5.1.2
>    Source code file: /home/mario/Scaricati/gromacs-
>  5.1.2/src/programs/mdrun/membed.c, line: 1079
>
>    Input error or input inconsistency:
>    Sorry, parallel g_membed is not yet fully functional.
>    For more information and tips for troubleshooting, please check the
> GROMACS
>    website at http://www.gromacs.org/Documentation/Errors
>
> Could please someone help?

Does it work with -nt 1?

-Justin

-- 
==================================================

Justin A. Lemkul, Ph.D.
Ruth L. Kirschstein NRSA Postdoctoral Fellow

Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 629
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201

jalemkul at outerbanks.umaryland.edu | (410) 706-7441
http://mackerell.umaryland.edu/~jalemkul

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