[gmx-users] (no subject)

[Justin Lemkul]

On 6/14/16 4:38 AM, Sepideh Momeninezhad wrote:
> hello everyone,i want to know how can i make average structure for my
> molecule?
>

gmx rmsf -ox

Whether or not an average structure is at all meaningful or physical is another 
matter. http://www.gromacs.org/Documentation/Terminology/Average_Structure

-Justin

-- 
==================================================

Justin A. Lemkul, Ph.D.
Ruth L. Kirschstein NRSA Postdoctoral Fellow

Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 629
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201

jalemkul at outerbanks.umaryland.edu | (410) 706-7441
http://mackerell.umaryland.edu/~jalemkul

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